RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 NYAP1Q6ZVC0 841 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 STXBP4Q6ZWJ1 553 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 ZC3H3Q8IXZ2 948 aaKnown RBP9.66□□□□□ -0.86
SMAD4-206ENST00000588860 HS6ST3Q8IZP7 471 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 RDM1Q8NG50 284 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 ZNF592Q92610 1267 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 CDHR1Q96JP9 859 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 CAPNS2Q96L46 248 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 INPP4AQ96PE3 977 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-206ENST00000588860 IWS1Q96ST2 819 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 SENP7Q9BQF6 1050 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 NUP58Q9BVL2 599 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 MOV10L1Q9BXT6 1211 aaKnown RBP9.66□□□□□ -0.86
SMAD4-206ENST00000588860 BCAS3Q9H6U6 928 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 ZNF408Q9H9D4 720 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 OLFML3Q9NRN5 406 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 SEL1LQ9UBV2 794 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 PPP2R2CQ9Y2T4 447 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 ZMYM2Q9UBW7 1377 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 ASTN1O14525 1302 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 TTC26A0AVF1 554 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 KIF2AO00139 706 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 BACH1O14867 736 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 NKRFO15226 690 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 MAFGO15525 162 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 SORBS3O60504 671 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 USO1O60763 962 aaKnown RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 LYPLA2O95372 231 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 ERCC3P19447 782 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 FECHP22830 423 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 NR2F2P24468 414 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 YWHABP31946 246 aaKnown RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 RARRES1P49788 294 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 ALDH5A1P51649 535 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 ZNF131P52739 623 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 TERF1P54274 439 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 GRM1Q13255 1194 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 ADAM9Q13443 819 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 MOGSQ13724 837 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 MTF1Q14872 753 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 STXBP2Q15833 593 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 TSR1Q2NL82 804 aaKnown RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 HABP4Q5JVS0 413 aaKnown RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 ODR4Q5SWX8 454 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 RAD9BQ6WBX8 426 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 PAXIP1Q6ZW49 1069 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 MAEAQ7L5Y9 396 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 FASTKD5Q7L8L6 764 aaKnown RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 FAM178BQ8IXR5 827 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 RETREG2Q8NC44 543 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 DNERQ8NFT8 737 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 PRIMPOLQ96LW4 560 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 ERGIC2Q96RQ1 377 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 DESI2Q9BSY9 194 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 NDST4Q9H3R1 872 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 JPH1Q9HDC5 661 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 TYW1Q9NV66 732 aaKnown RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 CAPN11Q9UMQ6 739 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 TRAF3IP3Q9Y228 551 aa9.65□□□□□ -0.86
SMAD4-206ENST00000588860 LUC7L2Q9Y383 392 aaKnown RBP9.65□□□□□ -0.86
SMAD4-206ENST00000588860 UQCRHLA0A096LP55 91 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 TMEM150BA6NC51 233 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 SPATA31C2B4DYI2 1134 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 K7ENM7 598 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 DLL1O00548 723 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 PDXKO00764 312 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 CA12O43570 354 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 EIF3JO75822 258 aaKnown RBP9.64□□□□□ -0.87
SMAD4-206ENST00000588860 RGS20O76081 388 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 SLC25A27O95847 323 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 NR3C1P04150 777 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 PSAPP07602 524 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 UQCRHP07919 91 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 TRIM21P19474 475 aaKnown RBP9.64□□□□□ -0.87
SMAD4-206ENST00000588860 COPB2P35606 906 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 GJA5P36382 358 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 SP4Q02446 784 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 MAPK7Q13164 816 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 SNAPC2Q13487 334 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 ZC2HC1CQ53FD0 456 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-206ENST00000588860 XKR9Q5GH70 373 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 LDLRAD1Q5T700 205 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 MAP1SQ66K74 1059 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-206ENST00000588860 PLA2G4FQ68DD2 849 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 CYP26C1Q6V0L0 522 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 TMTC1Q8IUR5 882 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 REXO1L1PQ8IX06 675 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 C4orf19Q8IY42 314 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 SMAP1Q8IYB5 467 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-206ENST00000588860 OR8K1Q8NGG5 319 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 ATP6V0A1Q93050 837 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 IQCDQ96DY2 449 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 SLC10A4Q96EP9 437 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 ANKEF1Q9NU02 776 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 GABBR1Q9UBS5 961 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 SLC9A2Q9UBY0 812 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 SIK3Q9Y2K2 1263 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 PCDHA10Q9Y5I2 948 aa9.64□□□□□ -0.87
SMAD4-206ENST00000588860 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMAD4-206ENST00000588860 A0A1W2PQJ5 194 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms