RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 ODR4Q5SWX8 454 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 EFCAB12Q6NXP0 572 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 ANO5Q75V66 913 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 FAM184AQ8NB25 1140 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 NEK9Q8TD19 979 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 MAP7D2Q96T17 732 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 HSD17B14Q9BPX1 270 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 BACH2Q9BYV9 841 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 ADAMTS10Q9H324 1103 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 TMX1Q9H3N1 280 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 CDHR5Q9HBB8 845 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 WRAP73Q9P2S5 460 aaPredicted RBP11.78□□□□□ -0.52
TPM4-209ENST00000588483 KIF3AQ9Y496 699 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 ARID2Q68CP9 1835 aa11.78□□□□□ -0.52
TPM4-209ENST00000588483 PRRC2BQ5JSZ5 2229 aaKnown RBP11.78□□□□□ -0.52
TPM4-209ENST00000588483 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
TPM4-209ENST00000588483 NLRC5Q86WI3 1866 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 EPOPA6NHQ4 379 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 RPS6KA5O75582 802 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 GPC3P51654 580 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 GUCY1B3Q02153 619 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 KIZQ2M2Z5 673 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 RTN4RL1Q86UN2 441 aaPredicted RBP11.77□□□□□ -0.53
TPM4-209ENST00000588483 EXOC8Q8IYI6 725 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 METTL13Q8N6R0 699 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 ZNF689Q96CS4 500 aaPredicted RBP11.77□□□□□ -0.53
TPM4-209ENST00000588483 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 TGS1Q96RS0 853 aaKnown RBP11.77□□□□□ -0.53
TPM4-209ENST00000588483 JPH2Q9BR39 696 aaPredicted RBP11.77□□□□□ -0.53
TPM4-209ENST00000588483 LXNQ9BS40 222 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 DHX33Q9H6R0 707 aaKnown RBP11.77□□□□□ -0.53
TPM4-209ENST00000588483 ZSWIM4Q9H7M6 989 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 TTC12Q9H892 705 aaPredicted RBP11.77□□□□□ -0.53
TPM4-209ENST00000588483 CYP26B1Q9NR63 512 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 LMCD1Q9NZU5 365 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
TPM4-209ENST00000588483 PCDHA12Q9UN75 941 aa11.77□□□□□ -0.53
TPM4-209ENST00000588483 NOC2LQ9Y3T9 749 aaKnown RBP11.77□□□□□ -0.53
TPM4-209ENST00000588483 GPR182O15218 404 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 GAS2O43903 313 aaKnown RBP11.76□□□□□ -0.53
TPM4-209ENST00000588483 LPXNO60711 386 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 SLITRK3O94933 977 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 VTNP04004 478 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 LINC00271P0C7V0 271 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 EIF4BP23588 611 aaKnown RBP11.76□□□□□ -0.53
TPM4-209ENST00000588483 FOSBP53539 338 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 NLRP11P59045 1033 aaKnown RBP11.76□□□□□ -0.53
TPM4-209ENST00000588483 MTERF2Q49AM1 385 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 NCAPH2Q6IBW4 605 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 TRMT1LQ7Z2T5 733 aaKnown RBP11.76□□□□□ -0.53
TPM4-209ENST00000588483 SPRED2Q7Z698 418 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 FAM228AQ86W67 206 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 NPAS4Q8IUM7 802 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 LRRC71Q8N4P6 559 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 YME1L1Q96TA2 773 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 OSMRQ99650 979 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 TMEM60Q9H2L4 133 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 C1orf112Q9NSG2 853 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 ST3GAL5Q9UNP4 418 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 AKT3Q9Y243 479 aa11.76□□□□□ -0.53
TPM4-209ENST00000588483 MUC3AQ02505 3323 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 CUL9Q8IWT3 2517 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 TMEM150BA6NC51 233 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 DDX11L8A8MPP1 907 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 C5orf67F2Z3F1 127 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 MARCH6O60337 910 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 MGEA5O60502 916 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 DGKIO75912 1065 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 DARSP14868 501 aaKnown RBP11.75□□□□□ -0.53
TPM4-209ENST00000588483 YWHABP31946 246 aaKnown RBP11.75□□□□□ -0.53
TPM4-209ENST00000588483 RFC5P40937 340 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 SARSP49591 514 aaKnown RBP11.75□□□□□ -0.53
TPM4-209ENST00000588483 DRP2Q13474 957 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 DSC3Q14574 896 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 FAM117BQ6P1L5 589 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 ZNF410Q86VK4 478 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 CLP1Q92989 425 aaKnown RBP11.75□□□□□ -0.53
TPM4-209ENST00000588483 DYDC2Q96IM9 177 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 EIF2AK1Q9BQI3 630 aaKnown RBP11.75□□□□□ -0.53
TPM4-209ENST00000588483 RGS18Q9NS28 235 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 RNF216Q9NWF9 866 aaPredicted RBP11.75□□□□□ -0.53
TPM4-209ENST00000588483 RGL1Q9NZL6 768 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 MTCH2Q9Y6C9 303 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 ADGRA3Q8IWK6 1321 aa11.75□□□□□ -0.53
TPM4-209ENST00000588483 FNDC1Q4ZHG4 1894 aaPredicted RBP11.74□□□□□ -0.53
TPM4-209ENST00000588483 C9IYK1 514 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 UPP2O95045 317 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 OR52Z1P0C646 297 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 STAG3L1P0CL83 205 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 XRCC6P12956 609 aaKnown RBP eCLIP11.74□□□□□ -0.53
TPM4-209ENST00000588483 MCM7P33993 719 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 TXKP42681 527 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 DNM2P50570 870 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 NPEPPSP55786 919 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 FAM189BP81408 668 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 GRB10Q13322 594 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 CUL4AQ13619 759 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms