RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CCDC60Q8IWA6 550 aaPredicted RBP11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 FAM178BQ8IXR5 827 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 CSGALNACT2Q8N6G5 542 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 NPLOC4Q8TAT6 608 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 ZNF507Q8TCN5 953 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 USP6NLQ92738 828 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 KIFAP3Q92845 792 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 MED15Q96RN5 788 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 GPR20Q99678 358 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 SRRTQ9BXP5 876 aaKnown RBP11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 PDGFCQ9NRA1 345 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 SAMSN1Q9NSI8 373 aaKnown RBP11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 IFNKQ9P0W0 207 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 IGSF9BQ9UPX0 1349 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 KIAA1217Q5T5P2 1943 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 LOXHD1Q8IVV2 1947 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 H0YCG3 227 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 CALUO43852 315 aaPredicted RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 SORBS3O60504 671 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 PPFIA4O75335 1185 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 ARIH2O95376 493 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 XRCC5P13010 732 aaKnown RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 PLS3P13797 630 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 SCP2P22307 547 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 EEF1GP26641 437 aaKnown RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 TCF7P36402 384 aaPredicted RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 RFC5P40937 340 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 SMTNP53814 917 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 NPEPPSP55786 919 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 RTP1P59025 263 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 FKBP3Q00688 224 aaKnown RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 PRKCEQ02156 737 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 LRRC41Q15345 812 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 KNOP1Q1ED39 458 aaKnown RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 DUSP28Q4G0W2 176 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 ODR4Q5SWX8 454 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 UTP14CQ5TAP6 766 aaKnown RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 ZNF720Q7Z2F6 126 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 TNS4Q8IZW8 715 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 GLG1Q92896 1179 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 HPS3Q969F9 1004 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 EMID1Q96A84 441 aaPredicted RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 ZIC5Q96T25 663 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 JPH2Q9BR39 696 aaPredicted RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 CFHR5Q9BXR6 569 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 HSD3B7Q9H2F3 369 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 SEMA6BQ9H3T3 888 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 CYP26B1Q9NR63 512 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 LIMA1Q9UHB6 759 aaKnown RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 SEPT9Q9UHD8 586 aaPredicted RBP11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 NRBP1Q9UHY1 535 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 GJD2Q9UKL4 321 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 UBE4BO95155 1302 aa11.6□□□□□ -0.55
CHMP1B-202ENST00000588284 PLXNB2O15031 1838 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 SFI1A8K8P3 1242 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 RSPH10B2B2RC85 870 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 PDXKO00764 312 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 USO1O60763 962 aaKnown RBP11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 GCNT3O95395 438 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 GNA14O95837 355 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 RSPH10BP0C881 870 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 ATP1A3P13637 1013 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 CYP2B6P20813 491 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 RPL13P26373 211 aaKnown RBP11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 HOXD10P28358 340 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 PSMC4P43686 418 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 ARHGEF6Q15052 776 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 BMT2Q1RMZ1 405 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 EDRF1Q3B7T1 1238 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 EPM2AIP1Q7L775 607 aaPredicted RBP11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 FILIP1Q7Z7B0 1213 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 GOLGA5Q8TBA6 731 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 SCFD1Q8WVM8 642 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 IFT74Q96LB3 600 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 CEP63Q96MT8 703 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 APBA2Q99767 749 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 DUSP9Q99956 384 aaKnown RBP11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 NTPCRQ9BSD7 190 aaKnown RBP11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 MFRPQ9BY79 579 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 KATNBL1Q9H079 304 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 ST6GALNAC4Q9H4F1 302 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 TMEM206Q9H813 350 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 ATP6V0A4Q9HBG4 840 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 PDLIM7Q9NR12 457 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 IMPACTQ9P2X3 320 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 ZHX1Q9UKY1 873 aaPredicted RBP11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 Q9Y3F1 56 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 EMSYQ7Z589 1322 aa11.59□□□□□ -0.55
CHMP1B-202ENST00000588284 KCNJ18B7U540 433 aa11.58□□□□□ -0.56
CHMP1B-202ENST00000588284 CETN3O15182 167 aa11.58□□□□□ -0.56
CHMP1B-202ENST00000588284 GAS2O43903 313 aaKnown RBP11.58□□□□□ -0.56
CHMP1B-202ENST00000588284 HBP1O60381 514 aa11.58□□□□□ -0.56
CHMP1B-202ENST00000588284 AOC2O75106 756 aa11.58□□□□□ -0.56
CHMP1B-202ENST00000588284 PRKCSHP14314 528 aaPredicted RBP11.58□□□□□ -0.56
CHMP1B-202ENST00000588284 ATP4AP20648 1035 aa11.58□□□□□ -0.56
CHMP1B-202ENST00000588284 ADCYAP1R1P41586 468 aa11.58□□□□□ -0.56
CHMP1B-202ENST00000588284 POLGP54098 1239 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms