RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 BRWD1Q9NSI6 2320 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 NCOR1O75376 2440 aa16.2■□□□□ 0.18
VMP1-206ENST00000587945 GRXCR2A6NFK2 248 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 C9IYK1 514 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 GPR182O15218 404 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 MAGEB2O15479 319 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 PSMD10O75832 226 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 MMP1P03956 469 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 ITGB1P05556 798 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 NLRP11P59045 1033 aaKnown RBP16.19■□□□□ 0.18
VMP1-206ENST00000587945 SCRN1Q12765 414 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 COL19A1Q14993 1142 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 Q4G0T1 1027 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 CPLX2Q6PUV4 134 aaKnown RBP16.19■□□□□ 0.18
VMP1-206ENST00000587945 FAM178BQ8IXR5 827 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 LINC01465Q8N7H1 131 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 KLHL23Q8NBE8 558 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 SPPL3Q8TCT6 385 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 ADAMTS10Q9H324 1103 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 IGFLR1Q9H665 355 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 NRBP2Q9NSY0 501 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 HCSTQ9UBK5 93 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 BDP1A6H8Y1 2624 aa16.19■□□□□ 0.18
VMP1-206ENST00000587945 TTC3P53804 2025 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 CYP3A7-CYP3A51PA0A087WV96 503 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 TMEM150BA6NC51 233 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 TBKBP1A7MCY6 615 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 CYP3A7P24462 503 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 IRS1P35568 1242 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 LTBRP36941 435 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 JAK3P52333 1124 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 DLX2Q07687 328 aaPredicted RBP16.18■□□□□ 0.18
VMP1-206ENST00000587945 CLUL1Q15846 466 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 SLC24A5Q71RS6 500 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 DAGLBQ8NCG7 672 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 P2RX5Q93086 422 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 MAP7D2Q96T17 732 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 C22orf23Q9BZE7 217 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 C1orf112Q9NSG2 853 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 GJB4Q9NTQ9 266 aa16.18■□□□□ 0.18
VMP1-206ENST00000587945 LINC01565O15544 149 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 FGFR1P11362 822 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 TMOD1P28289 359 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 SFNP31947 248 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 DSC3Q14574 896 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 INF2Q27J81 1249 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 CTC1Q2NKJ3 1217 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 ODR4Q5SWX8 454 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 SPOUT1Q5T280 376 aaKnown RBP16.17■□□□□ 0.18
VMP1-206ENST00000587945 MIER3Q7Z3K6 550 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 GJD3Q8N144 294 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 ETNPPLQ8TBG4 499 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 POF1BQ8WVV4 589 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 MBOAT7Q96N66 472 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 SH2D3AQ9BRG2 576 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 C1QTNF1Q9BXJ1 281 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 ATP6V0A4Q9HBG4 840 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 TPCN1Q9ULQ1 816 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 PCDHGC5Q9Y5F6 944 aa16.17■□□□□ 0.18
VMP1-206ENST00000587945 SLC37A4O43826 429 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 FGFR4P22455 802 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 SSTR3P32745 418 aaPredicted RBP16.16■□□□□ 0.18
VMP1-206ENST00000587945 FAM189BP81408 668 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 TBC1D8BQ0IIM8 1120 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 DRP2Q13474 957 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 NONOQ15233 471 aaKnown RBP eCLIP16.16■□□□□ 0.18
VMP1-206ENST00000587945 LETM2Q2VYF4 491 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 PUS10Q3MIT2 529 aaKnown RBP16.16■□□□□ 0.18
VMP1-206ENST00000587945 MTERF2Q49AM1 385 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 NAALADL2Q58DX5 795 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 GALNT17Q6IS24 598 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 B3GNT9Q6UX72 402 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 ADGRD2Q7Z7M1 963 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 SLKQ9H2G2 1235 aaPredicted RBP16.16■□□□□ 0.18
VMP1-206ENST00000587945 SEPT9Q9UHD8 586 aaPredicted RBP16.16■□□□□ 0.18
VMP1-206ENST00000587945 DDX25Q9UHL0 483 aaKnown RBP16.16■□□□□ 0.18
VMP1-206ENST00000587945 MYO7AQ13402 2215 aa16.16■□□□□ 0.18
VMP1-206ENST00000587945 FAM86C2PA6NEL3 165 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 NCK2O43639 380 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 CSDE1O75534 798 aaKnown RBP16.15■□□□□ 0.18
VMP1-206ENST00000587945 STBD1O95210 358 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 EIF4BP23588 611 aaKnown RBP16.15■□□□□ 0.18
VMP1-206ENST00000587945 GPC3P51654 580 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 TARBP2Q15633 366 aaKnown RBP16.15■□□□□ 0.18
VMP1-206ENST00000587945 KRT25Q7Z3Z0 450 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 RDM1Q8NG50 284 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 OXER1Q8TDS5 423 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 SCLT1Q96NL6 688 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 PHF20Q9BVI0 1012 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 TYW1Q9NV66 732 aaKnown RBP16.15■□□□□ 0.18
VMP1-206ENST00000587945 TMEM161AQ9NX61 479 aa16.15■□□□□ 0.18
VMP1-206ENST00000587945 PFKFB2O60825 505 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 TBX10O75333 385 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 CDKL5O76039 1030 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 CTDNEP1O95476 244 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 DARSP14868 501 aaKnown RBP16.14■□□□□ 0.17
VMP1-206ENST00000587945 XKR3Q5GH77 459 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 MOXD1Q6UVY6 613 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 RBM23Q86U06 439 aaKnown RBP16.14■□□□□ 0.17
VMP1-206ENST00000587945 NLRP7Q8WX94 980 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms