RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 GBP1P32455 592 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 CASP5P51878 434 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 SETQ01105 290 aaPredicted RBP20.23■□□□□ 0.83
DDX39A-206ENST00000587730 CACNB1Q02641 598 aaPredicted RBP20.23■□□□□ 0.83
DDX39A-206ENST00000587730 PABPC4Q13310 644 aaKnown RBP eCLIP20.23■□□□□ 0.831e-6■□□□□ 8.6
DDX39A-206ENST00000587730 CROCCP2Q86T23 111 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 CNPY4Q8N129 248 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 ZNF473Q8WTR7 871 aaKnown RBP20.23■□□□□ 0.83
DDX39A-206ENST00000587730 GMCL1Q96IK5 515 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 CEP89Q96ST8 783 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 STK33Q9BYT3 514 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 TUFT1Q9NNX1 390 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 SIX2Q9NPC8 291 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 RABGAP1Q9Y3P9 1069 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 LTBP1Q14766 1721 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 ASTN1O14525 1302 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 ARFGEF1Q9Y6D6 1849 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 GOLGA6L10A0A0M3HER8 536 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 PPEF1O14829 653 aaPredicted RBP20.23■□□□□ 0.83
DDX39A-206ENST00000587730 PLSCR1O15162 318 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 STAT3P40763 770 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 LIG3P49916 1009 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 TCERG1LQ5VWI1 586 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 CDC42EP5Q6NZY7 148 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 NT5DC3Q86UY8 548 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 FBXO11Q86XK2 927 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 CLEC10AQ8IUN9 316 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 GMCL1P1Q8NEA9 526 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 MYCBPAPQ8TBZ2 947 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 RFFLQ8WZ73 363 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 GJA10Q969M2 543 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 CCT8L2Q96SF2 557 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 ZC3H12CQ9C0D7 883 aaKnown RBP20.23■□□□□ 0.83
DDX39A-206ENST00000587730 CNOT10Q9H9A5 744 aaKnown RBP20.23■□□□□ 0.83
DDX39A-206ENST00000587730 KCND2Q9NZV8 630 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 H0YGN5 161 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 HSPA6P17066 643 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 HOXD13P35453 343 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 SOX5P35711 763 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 GTF2A1P52655 376 aaPredicted RBP20.22■□□□□ 0.83
DDX39A-206ENST00000587730 GUCY1A3Q02108 690 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 PPP2R5AQ15172 486 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 SKIDA1Q1XH10 827 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 SWT1Q5T5J6 900 aaKnown RBP20.22■□□□□ 0.83
DDX39A-206ENST00000587730 DAAM2Q86T65 1068 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
DDX39A-206ENST00000587730 P3H4Q92791 437 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 CARD9Q9H257 536 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 NFS1Q9Y697 457 aa20.22■□□□□ 0.83
DDX39A-206ENST00000587730 ANKRD65E5RJM6 399 aa20.21■□□□□ 0.83
DDX39A-206ENST00000587730 GCNT3O95395 438 aa20.21■□□□□ 0.83
DDX39A-206ENST00000587730 PAEPP09466 180 aa20.21■□□□□ 0.83
DDX39A-206ENST00000587730 TTC19Q6DKK2 380 aaPredicted RBP20.21■□□□□ 0.83
DDX39A-206ENST00000587730 TMEM179Q6ZVK1 233 aa20.21■□□□□ 0.83
DDX39A-206ENST00000587730 PRPF38AQ8NAV1 312 aaKnown RBP20.21■□□□□ 0.83
DDX39A-206ENST00000587730 LENG9Q96B70 501 aa20.21■□□□□ 0.83
DDX39A-206ENST00000587730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.2■□□□□ 0.82
DDX39A-206ENST00000587730 FAM187AA6NFU0 413 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 PIK3CDO00329 1044 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 DDX3XO00571 662 aaKnown RBP eCLIP20.2■□□□□ 0.82
DDX39A-206ENST00000587730 GYS1P13807 737 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 ZNF844Q08AG5 666 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 MYBPC2Q14324 1141 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 HS2ST1Q7LGA3 356 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 SLC51AQ86UW1 340 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 TAX1BP1Q86VP1 789 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 FAM186BQ8IYM0 893 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 SLC30A5Q8TAD4 765 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 CTNNBL1Q8WYA6 563 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-206ENST00000587730 BORCS6Q96GS4 357 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 ACTR5Q9H9F9 607 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-206ENST00000587730 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.2■□□□□ 0.82
DDX39A-206ENST00000587730 PI4KBQ9UBF8 816 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 VAV3Q9UKW4 847 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 SAMM50Q9Y512 469 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 FAM13AO94988 1023 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 EEF2P13639 858 aaKnown RBP20.2■□□□□ 0.82
DDX39A-206ENST00000587730 BAG6P46379 1132 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 RNASE9P60153 205 aaKnown RBP20.2■□□□□ 0.82
DDX39A-206ENST00000587730 CERKLQ49MI3 558 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-206ENST00000587730 HOOK3Q86VS8 718 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 U2AF1L4Q8WU68 220 aaKnown RBP20.2■□□□□ 0.82
DDX39A-206ENST00000587730 CAMKK2Q96RR4 588 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 YY1AP1Q9H869 796 aa20.2■□□□□ 0.82
DDX39A-206ENST00000587730 GMNCA6NCL1 334 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 VGLL3A8MV65 326 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 F8VZ95 297 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 H0YHG0 523 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 GUCY2CP25092 1073 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 HADHBP55084 474 aaKnown RBP20.19■□□□□ 0.82
DDX39A-206ENST00000587730 PTENP60484 403 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 HDLBPQ00341 1268 aaKnown RBP20.19■□□□□ 0.82
DDX39A-206ENST00000587730 DHX34Q14147 1143 aaKnown RBP20.19■□□□□ 0.82
DDX39A-206ENST00000587730 UBR3Q6ZT12 1888 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 TMC3Q7Z5M5 1100 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 ZDHHC15Q96MV8 337 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 BHMT2Q9H2M3 363 aa20.19■□□□□ 0.82
DDX39A-206ENST00000587730 MYH4Q9Y623 1939 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 GALCP54803 685 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 PSMC6P62333 389 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms