RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 PPP1R9BQ96SB3 815 aa13.2□□□□□ -0.3
TNFRSF11A-203ENST00000587697 DUSP9Q99956 384 aaKnown RBP13.2□□□□□ -0.3
TNFRSF11A-203ENST00000587697 SEMA6BQ9H3T3 888 aa13.2□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ZHX3Q9H4I2 956 aa13.2□□□□□ -0.3
TNFRSF11A-203ENST00000587697 SMARCAD1Q9H4L7 1026 aa13.2□□□□□ -0.3
TNFRSF11A-203ENST00000587697 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
TNFRSF11A-203ENST00000587697 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
TNFRSF11A-203ENST00000587697 SFI1A8K8P3 1242 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 GPR25O00155 361 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 PPP1R37O75864 691 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ADCY5O95622 1261 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MMP3P08254 477 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MAPTP10636 758 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 CYBAP13498 195 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ATP1A3P13637 1013 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 PLS3P13797 630 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ZNF75DP51815 510 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 RTP1P59025 263 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 LRRC63Q05C16 580 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 CCDC173Q0VFZ6 552 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 EMC2Q15006 297 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 PLCB4Q15147 1175 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MTERF2Q49AM1 385 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MYCT1Q8N699 235 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MCPH1Q8NEM0 835 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 TRPV1Q8NER1 839 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ZNF507Q8TCN5 953 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ANP32BQ92688 251 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 GLG1Q92896 1179 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 STRA6Q9BX79 667 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 DHX33Q9H6R0 707 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MRPL44Q9H9J2 332 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ATP6V0A4Q9HBG4 840 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 POLD4Q9HCU8 107 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 NRBP2Q9NSY0 501 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 Q9Y3F1 56 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ZMYM2Q9UBW7 1377 aa13.19□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 KIF20AO95235 890 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MYBP10242 640 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 HOXD13P35453 343 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 RFC5P40937 340 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ODR4Q5SWX8 454 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ANKRD40Q6AI12 368 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 FAM178BQ8IXR5 827 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 KIFAP3Q92845 792 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 C16orf70Q9BSU1 422 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 KCTD10Q9H3F6 313 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ST6GALNAC4Q9H4F1 302 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 GPRC5CQ9NQ84 441 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ERAP1Q9NZ08 941 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 SRRDQ9UH36 339 aa13.18□□□□□ -0.3
TNFRSF11A-203ENST00000587697 A6NJR5 290 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MAFO75444 373 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 GCNT3O95395 438 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 GNRH1P01148 92 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 AKR1A1P14550 325 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 POLGP54098 1239 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 NCKAP1LP55160 1127 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 FANCCQ00597 558 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ALCAMQ13740 583 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 FAM102BQ5T8I3 360 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MFSD14CQ5VZR4 134 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 LRRC55Q6ZSA7 311 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MAEAQ7L5Y9 396 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 APTXQ7Z2E3 356 aaKnown RBP13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 TLK2Q86UE8 772 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 IRF2BP1Q8IU81 584 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ZC3H3Q8IXZ2 948 aaKnown RBP13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MRFAP1L1Q96HT8 127 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 THAP9Q9H5L6 903 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 C17orf75Q9HAS0 396 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 FAM184BQ9ULE4 1060 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 COL1A2P08123 1366 aa13.17□□□□□ -0.3
TNFRSF11A-203ENST00000587697 IGKV6-21A0A0C4DH24 114 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 HBP1O60381 514 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 PRPF6O94906 941 aaKnown RBP13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ZNF286BP0CG31 522 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 MARK3P27448 753 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 CDC25BP30305 580 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 PLCB2Q00722 1185 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 SPAG1Q07617 926 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 DGKDQ16760 1214 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 TPD52L1Q16890 204 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 KNOP1Q1ED39 458 aaKnown RBP13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 EDRF1Q3B7T1 1238 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
TNFRSF11A-203ENST00000587697 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms