RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 IRF9Q00978 393 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 BMS1Q14692 1282 aaKnown RBP6.25□□□□□ -1.41
VMP1-205ENST00000587470 R3HDM1Q15032 1099 aaKnown RBP6.25□□□□□ -1.41
VMP1-205ENST00000587470 FNDC3BQ53EP0 1204 aaKnown RBP6.25□□□□□ -1.41
VMP1-205ENST00000587470 TMEM200BQ69YZ2 307 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 FSTL4Q6MZW2 842 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 OTOP1Q7RTM1 612 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 SPRED1Q7Z699 444 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 DDX53Q86TM3 631 aaKnown RBP6.25□□□□□ -1.41
VMP1-205ENST00000587470 PALM2Q8IXS6 379 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 CALML6Q8TD86 181 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 BOCQ9BWV1 1114 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 Q9UFV3 132 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 CDC42EP3Q9UKI2 254 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 NR2E1Q9Y466 385 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 TSPOAP1O95153 1857 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 MAPKBP1O60336 1514 aa6.25□□□□□ -1.41
VMP1-205ENST00000587470 RASSF10A6NK89 507 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 ARHGAP6O43182 974 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 ZBTB48P10074 688 aaPredicted RBP6.24□□□□□ -1.41
VMP1-205ENST00000587470 MOGSQ13724 837 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 NFYCQ13952 458 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 NOLC1Q14978 699 aaKnown RBP eCLIP6.24□□□□□ -1.41
VMP1-205ENST00000587470 CATSPEREQ5SY80 951 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 TRIM68Q6AZZ1 485 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 GRAMD4Q6IC98 578 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 CC2D1AQ6P1N0 951 aaPredicted RBP6.24□□□□□ -1.41
VMP1-205ENST00000587470 USP30Q70CQ3 517 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 LARP4Q71RC2 724 aaKnown RBP eCLIP6.24□□□□□ -1.41
VMP1-205ENST00000587470 MRFAP1L1Q96HT8 127 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 OAZ3Q9UMX2 235 aa6.24□□□□□ -1.41
VMP1-205ENST00000587470 CEP170Q5SW79 1584 aa6.23□□□□□ -1.41
VMP1-205ENST00000587470 COMTP21964 271 aa6.23□□□□□ -1.41
VMP1-205ENST00000587470 APEX1P27695 318 aaKnown RBP6.23□□□□□ -1.41
VMP1-205ENST00000587470 IGFALSP35858 605 aa6.23□□□□□ -1.41
VMP1-205ENST00000587470 MEOX1P50221 254 aa6.23□□□□□ -1.41
VMP1-205ENST00000587470 MECP2P51608 486 aaKnown RBP6.23□□□□□ -1.41
VMP1-205ENST00000587470 PCOLCEQ15113 449 aa6.23□□□□□ -1.41
VMP1-205ENST00000587470 ZCCHC8Q6NZY4 707 aaKnown RBP6.23□□□□□ -1.41
VMP1-205ENST00000587470 CLUHP3Q96NS8 147 aa6.23□□□□□ -1.41
VMP1-205ENST00000587470 MSL2Q9HCI7 577 aa6.23□□□□□ -1.41
VMP1-205ENST00000587470 WRNQ14191 1432 aaPredicted RBP eCLIP6.23□□□□□ -1.41
VMP1-205ENST00000587470 FGD5Q6ZNL6 1462 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 TOP2BQ02880 1626 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 M0R2C6 588 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 CDC14BO60729 498 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 MAFO75444 373 aaPredicted RBP6.22□□□□□ -1.41
VMP1-205ENST00000587470 RAD17O75943 681 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 ASLP04424 464 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 MRE11P49959 708 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 SQSTM1Q13501 440 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 PRKD1Q15139 912 aaPredicted RBP6.22□□□□□ -1.41
VMP1-205ENST00000587470 TBR1Q16650 682 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 AGBL4Q5VU57 503 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 FILIP1Q7Z7B0 1213 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 FUKQ8N0W3 1084 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 DPYSL5Q9BPU6 564 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 KIAA1683Q9H0B3 1180 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 OR10A2Q9H208 303 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 C12orf65Q9H3J6 166 aaKnown RBP6.22□□□□□ -1.41
VMP1-205ENST00000587470 ZSWIM4Q9H7M6 989 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 SAMD15Q9P1V8 674 aa6.22□□□□□ -1.41
VMP1-205ENST00000587470 PUF60Q9UHX1 559 aaKnown RBP6.22□□□□□ -1.41
VMP1-205ENST00000587470 RPS19P39019 145 aaKnown RBP6.21□□□□□ -1.42
VMP1-205ENST00000587470 FNTBP49356 437 aa6.21□□□□□ -1.42
VMP1-205ENST00000587470 MAP3K12Q12852 859 aa6.21□□□□□ -1.42
VMP1-205ENST00000587470 RTKN2Q8IZC4 609 aa6.21□□□□□ -1.42
VMP1-205ENST00000587470 Q8N1X5 172 aa6.21□□□□□ -1.42
VMP1-205ENST00000587470 EDAQ92838 391 aa6.21□□□□□ -1.42
VMP1-205ENST00000587470 ERCC4Q92889 916 aaPredicted RBP6.21□□□□□ -1.42
VMP1-205ENST00000587470 E2F7Q96AV8 911 aa6.21□□□□□ -1.42
VMP1-205ENST00000587470 FOXRED1Q96CU9 486 aaPredicted RBP6.21□□□□□ -1.42
VMP1-205ENST00000587470 DRC1Q96MC2 740 aa6.21□□□□□ -1.42
VMP1-205ENST00000587470 ADOQ96SZ5 270 aa6.21□□□□□ -1.42
VMP1-205ENST00000587470 SLC30A1Q9Y6M5 507 aa6.21□□□□□ -1.42
VMP1-205ENST00000587470 SPATA31D1Q6ZQQ2 1576 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 MATN2O00339 956 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 OPA1O60313 960 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 GLRX3O76003 335 aaKnown RBP6.2□□□□□ -1.42
VMP1-205ENST00000587470 KRT37O76014 449 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 ALDH6A1Q02252 535 aaKnown RBP6.2□□□□□ -1.42
VMP1-205ENST00000587470 SPDYAQ5MJ70 313 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 POLNQ7Z5Q5 900 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 RTN4RL1Q86UN2 441 aaPredicted RBP6.2□□□□□ -1.42
VMP1-205ENST00000587470 CHST14Q8NCH0 376 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 SH3TC2Q8TF17 1288 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 CFHR4Q92496 578 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 UBXN4Q92575 508 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 OR14A2Q96R54 314 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 FOXB1Q99853 325 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 CABP5Q9NP86 173 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 ACSS2Q9NR19 701 aa6.2□□□□□ -1.42
VMP1-205ENST00000587470 TNPO3Q9Y5L0 923 aaKnown RBP6.2□□□□□ -1.42
VMP1-205ENST00000587470 DNAJC8O75937 253 aaPredicted RBP6.19□□□□□ -1.42
VMP1-205ENST00000587470 AMHP03971 560 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 C6P13671 934 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 TACR2P21452 398 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 FLT3P36888 993 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 STAT5BP51692 787 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 KIF11P52732 1056 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms