RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CNGA4Q8IV77 575 aa21.86■■□□□ 1.09
TRIM47-204ENST00000587339 GPRC5CQ9NQ84 441 aa21.86■■□□□ 1.09
TRIM47-204ENST00000587339 IGKV6D-21A0A0A0MT36 114 aa21.85■■□□□ 1.09
TRIM47-204ENST00000587339 TGFB1I1O43294 461 aa21.85■■□□□ 1.09
TRIM47-204ENST00000587339 ALCAMQ13740 583 aa21.85■■□□□ 1.09
TRIM47-204ENST00000587339 ARMCX2Q7L311 632 aa21.85■■□□□ 1.09
TRIM47-204ENST00000587339 GPR142Q7Z601 462 aa21.85■■□□□ 1.09
TRIM47-204ENST00000587339 BAG1Q99933 345 aaPredicted RBP21.85■■□□□ 1.09
TRIM47-204ENST00000587339 CYP26B1Q9NR63 512 aa21.85■■□□□ 1.09
TRIM47-204ENST00000587339 ZMYM2Q9UBW7 1377 aa21.85■■□□□ 1.09
TRIM47-204ENST00000587339 GSTTP1A0A1W2PQM5 241 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 MANSC4A6NHS7 340 aaPredicted RBP21.84■■□□□ 1.09
TRIM47-204ENST00000587339 MFAP3LO75121 409 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 PPP1R37O75864 691 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 DGAT1O75907 488 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 NR3C1P04150 777 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 FXR1P51114 621 aaKnown RBP eCLIP21.84■■□□□ 1.09
TRIM47-204ENST00000587339 RGMBQ6NW40 437 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 KSR1Q8IVT5 923 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 SEPT1Q8WYJ6 367 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 PANX2Q96RD6 677 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 STRA6Q9BX79 667 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 ZNFX1Q9P2E3 1918 aaKnown RBP21.84■■□□□ 1.09
TRIM47-204ENST00000587339 WDR81Q562E7 1941 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 OATP04181 439 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 SYCP1Q15431 976 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 HS2ST1Q7LGA3 356 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 ERGIC2Q96RQ1 377 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 MYH11P35749 1972 aa21.84■■□□□ 1.09
TRIM47-204ENST00000587339 STX10O60499 249 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 ATP4AP20648 1035 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 TCF7P36402 384 aaPredicted RBP21.83■■□□□ 1.09
TRIM47-204ENST00000587339 KCNJ6P48051 423 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 PEX3P56589 373 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 CELF3Q5SZQ8 465 aaKnown RBP21.83■■□□□ 1.09
TRIM47-204ENST00000587339 FAM160B1Q5W0V3 765 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 CCDC62Q6P9F0 684 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 TMEM139Q8IV31 216 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 MCPH1Q8NEM0 835 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 KIFAP3Q92845 792 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 GBP3Q9H0R5 595 aa21.83■■□□□ 1.09
TRIM47-204ENST00000587339 IGF2BP3O00425 579 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRIM47-204ENST00000587339 NOP56O00567 594 aaKnown RBP21.82■■□□□ 1.08
TRIM47-204ENST00000587339 CLIC2O15247 247 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 TXNP10599 105 aaKnown RBP21.82■■□□□ 1.08
TRIM47-204ENST00000587339 MAPK4P31152 587 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 STAT5BP51692 787 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 TTLL4Q14679 1199 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 MTERF2Q49AM1 385 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 DPP9Q86TI2 863 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 TRIM59Q8IWR1 403 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 DHX37Q8IY37 1157 aaKnown RBP21.82■■□□□ 1.08
TRIM47-204ENST00000587339 SYCP3Q8IZU3 236 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 SLC17A8Q8NDX2 589 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 SCFD2Q8WU76 684 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 CCDC51Q96ER9 411 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 PCMTD1Q96MG8 357 aaPredicted RBP21.82■■□□□ 1.08
TRIM47-204ENST00000587339 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRIM47-204ENST00000587339 PLXNB2O15031 1838 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 TRIM21P19474 475 aaKnown RBP21.82■■□□□ 1.08
TRIM47-204ENST00000587339 SMTNP53814 917 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 DMP1Q13316 513 aaPredicted RBP21.82■■□□□ 1.08
TRIM47-204ENST00000587339 GRB14Q14449 540 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 HSDL1Q3SXM5 330 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 HAUS6Q7Z4H7 955 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 PLEKHH3Q7Z736 793 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 ZNF467Q7Z7K2 595 aaPredicted RBP21.82■■□□□ 1.08
TRIM47-204ENST00000587339 GOLGA5Q8TBA6 731 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 AFAP1L1Q8TED9 768 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 PCYT2Q99447 389 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 NUP58Q9BVL2 599 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 IKZF4Q9H2S9 585 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 ST6GALNAC4Q9H4F1 302 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 AZI2Q9H6S1 392 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 TMEM206Q9H813 350 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 C17orf75Q9HAS0 396 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 ATP6V0A4Q9HBG4 840 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 PASKQ96RG2 1323 aa21.82■■□□□ 1.08
TRIM47-204ENST00000587339 ARHGAP6O43182 974 aa21.81■■□□□ 1.08
TRIM47-204ENST00000587339 NCKAP1LP55160 1127 aa21.81■■□□□ 1.08
TRIM47-204ENST00000587339 NFIL3Q16649 462 aa21.81■■□□□ 1.08
TRIM47-204ENST00000587339 FRMD5Q7Z6J6 570 aa21.81■■□□□ 1.08
TRIM47-204ENST00000587339 RETREG2Q8NC44 543 aa21.81■■□□□ 1.08
TRIM47-204ENST00000587339 ZCCHC17Q9NP64 241 aaKnown RBP21.81■■□□□ 1.08
TRIM47-204ENST00000587339 PDLIM7Q9NR12 457 aa21.81■■□□□ 1.08
TRIM47-204ENST00000587339 PDGFCQ9NRA1 345 aa21.81■■□□□ 1.08
TRIM47-204ENST00000587339 ARMCX3Q9UH62 379 aaPredicted RBP21.81■■□□□ 1.08
TRIM47-204ENST00000587339 CPA4Q9UI42 421 aa21.81■■□□□ 1.08
TRIM47-204ENST00000587339 SLC16A3O15427 465 aaKnown RBP21.8■■□□□ 1.08
TRIM47-204ENST00000587339 AKAP3O75969 853 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 POLGP54098 1239 aaPredicted RBP21.8■■□□□ 1.08
TRIM47-204ENST00000587339 TAF1CQ15572 869 aaPredicted RBP21.8■■□□□ 1.08
TRIM47-204ENST00000587339 SPATA33Q96N06 139 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 GPR20Q99678 358 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 AGPAT3Q9NRZ7 376 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 ABHD10Q9NUJ1 306 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 FAM184BQ9ULE4 1060 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 TTC26A0AVF1 554 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 CCDC169A6NNP5 214 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 SLC16A4O15374 487 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms