RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 KCNMA1Q12791 1236 aa24.48■■□□□ 1.51
CIRBP-208ENST00000586548 FSTL1Q12841 308 aa24.48■■□□□ 1.51
CIRBP-208ENST00000586548 PLA2G4FQ68DD2 849 aa24.48■■□□□ 1.51
CIRBP-208ENST00000586548 MAEAQ7L5Y9 396 aa24.48■■□□□ 1.51
CIRBP-208ENST00000586548 NEK11Q8NG66 645 aa24.48■■□□□ 1.51
CIRBP-208ENST00000586548 SMCR8Q8TEV9 937 aaPredicted RBP24.48■■□□□ 1.51
CIRBP-208ENST00000586548 CHP1Q99653 195 aa24.48■■□□□ 1.51
CIRBP-208ENST00000586548 GBP3Q9H0R5 595 aa24.48■■□□□ 1.51
CIRBP-208ENST00000586548 FAM207AQ9NSI2 230 aaPredicted RBP24.48■■□□□ 1.51
CIRBP-208ENST00000586548 PHLPP2Q6ZVD8 1323 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 CLIC2O15247 247 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 ZNF862O60290 1169 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 AKAP3O75969 853 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 SUPT20HL2P0C7V6 817 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 POTEJP0CG39 1038 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 HNRNPH3P31942 346 aaKnown RBP24.47■■□□□ 1.51
CIRBP-208ENST00000586548 SWSAP1Q6NVH7 229 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 SYT10Q6XYQ8 523 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 SLC17A8Q8NDX2 589 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 GTF3C2Q8WUA4 911 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-208ENST00000586548 MPHOSPH6Q99547 160 aaKnown RBP24.47■■□□□ 1.51
CIRBP-208ENST00000586548 MKNK1Q9BUB5 465 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 ST6GALNAC4Q9H4F1 302 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 IGSF9BQ9UPX0 1349 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 STBD1O95210 358 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 NPEPPSP55786 919 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 SP2Q02086 613 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 KCNH2Q12809 1159 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 MAP1SQ66K74 1059 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-208ENST00000586548 CCDC60Q8IWA6 550 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-208ENST00000586548 PNMA3Q9UL41 463 aa24.47■■□□□ 1.51
CIRBP-208ENST00000586548 EPN1Q9Y6I3 576 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-208ENST00000586548 EPHB6O15197 1021 aa24.46■■□□□ 1.51
CIRBP-208ENST00000586548 ATG7O95352 703 aa24.46■■□□□ 1.51
CIRBP-208ENST00000586548 XRCC5P13010 732 aaKnown RBP24.46■■□□□ 1.51
CIRBP-208ENST00000586548 SEPT14Q6ZU15 432 aa24.46■■□□□ 1.51
CIRBP-208ENST00000586548 KSR1Q8IVT5 923 aa24.46■■□□□ 1.51
CIRBP-208ENST00000586548 CCDC155Q8N6L0 562 aa24.46■■□□□ 1.51
CIRBP-208ENST00000586548 MROH8Q9H579 483 aa24.46■■□□□ 1.51
CIRBP-208ENST00000586548 TMEM206Q9H813 350 aa24.46■■□□□ 1.51
CIRBP-208ENST00000586548 AGPAT3Q9NRZ7 376 aa24.46■■□□□ 1.51
CIRBP-208ENST00000586548 DMAC2Q9NW81 257 aa24.46■■□□□ 1.51
CIRBP-208ENST00000586548 MYH9P35579 1960 aaKnown RBP24.45■■□□□ 1.51
CIRBP-208ENST00000586548 NDUFA10O95299 355 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 AFPP02771 609 aaKnown RBP24.45■■□□□ 1.5
CIRBP-208ENST00000586548 PSMC2P35998 433 aaKnown RBP24.45■■□□□ 1.5
CIRBP-208ENST00000586548 CASP4P49662 377 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 FKBP1BP68106 108 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 SP4Q02446 784 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 MYBPC2Q14324 1141 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 Q3C1V9 767 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 CYFIP1Q7L576 1253 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 SYCP3Q8IZU3 236 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 ACCSQ96QU6 501 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 SH2D3AQ9BRG2 576 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 ZNF408Q9H9D4 720 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 PLAGL2Q9UPG8 496 aa24.45■■□□□ 1.5
CIRBP-208ENST00000586548 NCKAP1LP55160 1127 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 PRKCEQ02156 737 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 SLC9A9Q8IVB4 645 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 CCDC170Q8IYT3 715 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 ACRBPQ8NEB7 543 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 SHCBP1Q8NEM2 672 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 CEP170P1Q96L14 293 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 CEP72Q9P209 647 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 CGNQ9P2M7 1197 aaKnown RBP24.44■■□□□ 1.5
CIRBP-208ENST00000586548 TELO2Q9Y4R8 837 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 SYNGAP1Q96PV0 1343 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 DNAJC25-GNG10A0A024R161 153 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 GTF2BQ00403 316 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 KCTD2Q14681 263 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 XKR3Q5GH77 459 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 FAM102BQ5T8I3 360 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 FAM186BQ8IYM0 893 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 TMEM174Q8WUU8 243 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 BAP1Q92560 729 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 KIFAP3Q92845 792 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 BORCS6Q96GS4 357 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 MMP19Q99542 508 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 LSM14BQ9BX40 385 aaKnown RBP24.44■■□□□ 1.5
CIRBP-208ENST00000586548 IKZF4Q9H2S9 585 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 R3HDMLQ9H3Y0 253 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 DNAI1Q9UI46 699 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 SLC45A1Q9Y2W3 748 aa24.44■■□□□ 1.5
CIRBP-208ENST00000586548 TGFB3P10600 412 aa24.43■■□□□ 1.5
CIRBP-208ENST00000586548 CETPP11597 493 aa24.43■■□□□ 1.5
CIRBP-208ENST00000586548 UBA1P22314 1058 aaKnown RBP24.43■■□□□ 1.5
CIRBP-208ENST00000586548 CYLC1P35663 651 aaPredicted RBP24.43■■□□□ 1.5
CIRBP-208ENST00000586548 ERVK-9P63128 1117 aa24.43■■□□□ 1.5
CIRBP-208ENST00000586548 TRMT1LQ7Z2T5 733 aaKnown RBP24.43■■□□□ 1.5
CIRBP-208ENST00000586548 NUCKS1Q9H1E3 243 aaKnown RBP24.43■■□□□ 1.5
CIRBP-208ENST00000586548 GPRC5CQ9NQ84 441 aa24.43■■□□□ 1.5
CIRBP-208ENST00000586548 DYNC1I1O14576 645 aa24.42■■□□□ 1.5
CIRBP-208ENST00000586548 DGAT1O75907 488 aa24.42■■□□□ 1.5
CIRBP-208ENST00000586548 NEDD9Q14511 834 aa24.42■■□□□ 1.5
CIRBP-208ENST00000586548 PDXDC1Q6P996 788 aa24.42■■□□□ 1.5
CIRBP-208ENST00000586548 CACNA2D4Q7Z3S7 1137 aa24.42■■□□□ 1.5
CIRBP-208ENST00000586548 HAUS6Q7Z4H7 955 aa24.42■■□□□ 1.5
CIRBP-208ENST00000586548 MCPH1Q8NEM0 835 aa24.42■■□□□ 1.5
CIRBP-208ENST00000586548 SLC35C1Q96A29 364 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms