RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 HERC6Q8IVU3 1022 aa18.01■□□□□ 0.47
ATG4D-205ENST00000586477 GLG1Q92896 1179 aa18.01■□□□□ 0.47
ATG4D-205ENST00000586477 SLC9A7Q96T83 725 aa18.01■□□□□ 0.47
ATG4D-205ENST00000586477 UNC45AQ9H3U1 944 aa18.01■□□□□ 0.47
ATG4D-205ENST00000586477 FAM13BQ9NYF5 915 aa18.01■□□□□ 0.47
ATG4D-205ENST00000586477 SPTBN5Q9NRC6 3674 aaKnown RBP18.01■□□□□ 0.47
ATG4D-205ENST00000586477 TCHHQ07283 1943 aa18.01■□□□□ 0.47
ATG4D-205ENST00000586477 VCANP13611 3396 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 A0A1W2PQ27 194 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 A0A1W2PQ64 194 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 A0A1W2PQD8 194 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 P4HBP07237 508 aaKnown RBP18■□□□□ 0.47
ATG4D-205ENST00000586477 GNAT1P11488 350 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 ADGRE1Q14246 886 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 PLEKHG4Q58EX7 1191 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 FAM26DQ5JW98 314 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 SPRED2Q7Z698 418 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 DBF4BQ8NFT6 615 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 RASSF8Q8NHQ8 419 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 PHOSPHO2Q8TCD6 241 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 CALML4Q96GE6 196 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 CDK5RAP3Q96JB5 506 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 NT5C3AQ9H0P0 336 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 PRDM12Q9H4Q4 367 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 TUFT1Q9NNX1 390 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 CCDC39Q9UFE4 941 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 PCDHA7Q9UN72 937 aa18■□□□□ 0.47
ATG4D-205ENST00000586477 POTEMA6NI47 508 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 BACH1O14867 736 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 CAND2O75155 1236 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 CHRNA1P02708 482 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 CA3P07451 260 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 INSRRP14616 1297 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 ATP4AP20648 1035 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 MGAT3Q09327 533 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 PLPPR4Q7Z2D5 763 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 RPAINQ86UA6 219 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 CCDC60Q8IWA6 550 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-205ENST00000586477 TRAPPC12Q8WVT3 735 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 GAS2L1Q99501 681 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-205ENST00000586477 POLR3CQ9BUI4 534 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-205ENST00000586477 CCSER1Q9C0I3 900 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 CSRNP2Q9H175 543 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 EVPLQ92817 2033 aa17.99■□□□□ 0.47
ATG4D-205ENST00000586477 ABHD14A-ACY1A0A1B0GW23 586 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 LCHNA4D1U4 455 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 DDX11L8A8MPP1 907 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 CMA1P23946 247 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 RPA1P27694 616 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 QARSP47897 775 aaKnown RBP17.98■□□□□ 0.47
ATG4D-205ENST00000586477 STAT5BP51692 787 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 PSMC5P62195 406 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.98■□□□□ 0.47
ATG4D-205ENST00000586477 USP38Q8NB14 1042 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 SNX29Q8TEQ0 813 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 GJA10Q969M2 543 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 CCDC34Q96HJ3 373 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 COL25A1Q9BXS0 654 aaPredicted RBP17.98■□□□□ 0.47
ATG4D-205ENST00000586477 ZSWIM4Q9H7M6 989 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 SLC28A3Q9HAS3 691 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 GDPD2Q9HCC8 539 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 TUBE1Q9UJT0 475 aa17.98■□□□□ 0.47
ATG4D-205ENST00000586477 EPOPA6NHQ4 379 aa17.97■□□□□ 0.47
ATG4D-205ENST00000586477 ZBTB42B2RXF5 422 aa17.97■□□□□ 0.47
ATG4D-205ENST00000586477 CCT6AP40227 531 aaKnown RBP17.97■□□□□ 0.47
ATG4D-205ENST00000586477 UBE2HP62256 183 aa17.97■□□□□ 0.47
ATG4D-205ENST00000586477 IGBP1P78318 339 aa17.97■□□□□ 0.47
ATG4D-205ENST00000586477 IL17AQ16552 155 aa17.97■□□□□ 0.47
ATG4D-205ENST00000586477 AXDND1Q5T1B0 1012 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-205ENST00000586477 PPP2R2DQ66LE6 453 aa17.97■□□□□ 0.47
ATG4D-205ENST00000586477 CABP7Q86V35 215 aa17.97■□□□□ 0.47
ATG4D-205ENST00000586477 MRPS27Q92552 414 aaKnown RBP17.97■□□□□ 0.47
ATG4D-205ENST00000586477 FAM167AQ96KS9 214 aa17.97■□□□□ 0.47
ATG4D-205ENST00000586477 EIF2AK1Q9BQI3 630 aaKnown RBP17.97■□□□□ 0.47
ATG4D-205ENST00000586477 ZNF302Q9NR11 478 aa17.97■□□□□ 0.47
ATG4D-205ENST00000586477 KCNJ6P48051 423 aa17.96■□□□□ 0.47
ATG4D-205ENST00000586477 TAP1Q03518 808 aa17.96■□□□□ 0.47
ATG4D-205ENST00000586477 IKBKEQ14164 716 aa17.96■□□□□ 0.47
ATG4D-205ENST00000586477 RESP18Q5W5W9 173 aa17.96■□□□□ 0.47
ATG4D-205ENST00000586477 CCDC73Q6ZRK6 1079 aa17.96■□□□□ 0.47
ATG4D-205ENST00000586477 DNAJB3Q8WWF6 145 aa17.96■□□□□ 0.47
ATG4D-205ENST00000586477 SYMPKQ92797 1274 aaKnown RBP17.96■□□□□ 0.47
ATG4D-205ENST00000586477 CLIC6Q96NY7 704 aa17.96■□□□□ 0.47
ATG4D-205ENST00000586477 HSD17B14Q9BPX1 270 aa17.96■□□□□ 0.47
ATG4D-205ENST00000586477 IGSF9BQ9UPX0 1349 aa17.96■□□□□ 0.46
ATG4D-205ENST00000586477 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.95■□□□□ 0.46
ATG4D-205ENST00000586477 RRN3P2A6NIE6 340 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 EML1O00423 815 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 LYPLA2O95372 231 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 GJB5O95377 273 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
ATG4D-205ENST00000586477 HYIQ5T013 277 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 SWSAP1Q6NVH7 229 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 TAF2Q6P1X5 1199 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 PDXDC2PQ6P474 469 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 OTUD6AQ7L8S5 288 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 C4orf19Q8IY42 314 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 CHAMP1Q96JM3 812 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 LXNQ9BS40 222 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 GABBR1Q9UBS5 961 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms