RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SNCAIPQ9Y6H5 919 aa12.37□□□□□ -0.43
LIG3-204ENST00000585740 MYH9P35579 1960 aaKnown RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 TESPA1A2RU30 521 aaPredicted RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 SPDYE16A6NNV3 312 aaPredicted RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 EFCAB8A8MWE9 144 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 HIP1RO75146 1068 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 LCA5LO95447 670 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 PSMC2P35998 433 aaKnown RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 RARRES1P49788 294 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 RBM10P98175 930 aaKnown RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 SFMBT2Q5VUG0 894 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 RRAGAQ7L523 313 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 OTUD6AQ7L8S5 288 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 CEP112Q8N8E3 955 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 PROCA1Q8NCQ7 364 aaPredicted RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 DNERQ8NFT8 737 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 SMCR8Q8TEV9 937 aaPredicted RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 TMEM174Q8WUU8 243 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 BAP1Q92560 729 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 ATP6V0A1Q93050 837 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 JAKMIP2Q96AA8 810 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 HVCN1Q96D96 273 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 INPP4AQ96PE3 977 aaPredicted RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 GBP3Q9H0R5 595 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 DEF6Q9H4E7 631 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 ST6GALNAC4Q9H4F1 302 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 CYP39A1Q9NYL5 469 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 PKD2L1Q9P0L9 805 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 WRAP73Q9P2S5 460 aaPredicted RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 TSKSQ9UJT2 592 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 FBXL5Q9UKA1 691 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 REXO2Q9Y3B8 237 aaKnown RBP12.36□□□□□ -0.43
LIG3-204ENST00000585740 RIPK3Q9Y572 518 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 PFASO15067 1338 aa12.36□□□□□ -0.43
LIG3-204ENST00000585740 ARID2Q68CP9 1835 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 LRRC53A6NM62 1247 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 CXCL11O14625 94 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 PPP1R37O75864 691 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 SERPING1P05155 500 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 PLS3P13797 630 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 NMT1P30419 496 aaKnown RBP12.35□□□□□ -0.43
LIG3-204ENST00000585740 YWHABP31946 246 aaKnown RBP12.35□□□□□ -0.43
LIG3-204ENST00000585740 ABCD1P33897 745 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 COPB2P35606 906 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 VAV2P52735 878 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 HERVK_113P62684 666 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 PPATQ06203 517 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 MAPK7Q13164 816 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 VGLL4Q14135 290 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 HSP90AA2PQ14568 343 aaPredicted RBP12.35□□□□□ -0.43
LIG3-204ENST00000585740 PPP2R5AQ15172 486 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 CCDC122Q5T0U0 273 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 GBP6Q6ZN66 633 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.35□□□□□ -0.43
LIG3-204ENST00000585740 FMNL3Q8IVF7 1028 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 C12orf56Q8IXR9 622 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 SLC35F6Q8N357 371 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 PDCL2Q8N4E4 241 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 ZC3H15Q8WU90 426 aaKnown RBP12.35□□□□□ -0.43
LIG3-204ENST00000585740 UBXN4Q92575 508 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 WNK4Q96J92 1243 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 ACCSQ96QU6 501 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 FIZ1Q96SL8 496 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 STRA6Q9BX79 667 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 MOV10L1Q9BXT6 1211 aaKnown RBP12.35□□□□□ -0.43
LIG3-204ENST00000585740 DMAC2Q9NW81 257 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 KCNG1Q9UIX4 513 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 FRMD4BQ9Y2L6 1034 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 PCDHA10Q9Y5I2 948 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 LCTP09848 1927 aa12.35□□□□□ -0.43
LIG3-204ENST00000585740 ZMYM2Q9UBW7 1377 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 SFI1A8K8P3 1242 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 K7ENM7 598 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 NKRFO15226 690 aaKnown RBP eCLIP12.34□□□□□ -0.43
LIG3-204ENST00000585740 AKR1B10O60218 316 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 AKAP3O75969 853 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 PSAPP07602 524 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 ANXA13P27216 316 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 EIF4A3P38919 411 aaKnown RBP12.34□□□□□ -0.43
LIG3-204ENST00000585740 KIF11P52732 1056 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 KIF5AQ12840 1032 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 PLS1Q14651 629 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 EXOC3L4Q17RC7 722 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 CYP4F22Q6NT55 531 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 LBX2Q6XYB7 198 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
LIG3-204ENST00000585740 SYCP3Q8IZU3 236 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 TSC1Q92574 1164 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 CARD6Q9BX69 1037 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 GANQ9H2C0 597 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 C17orf75Q9HAS0 396 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
LIG3-204ENST00000585740 CDC23Q9UJX2 597 aa12.34□□□□□ -0.43
LIG3-204ENST00000585740 EXOC7Q9UPT5 735 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms