RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	MSRA	Q9UJ68	235 aa		18.2	■□□□□ 0.5
ERBB2-222	ENST00000584908	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	RBAK-RBAKDN	I3L0D1	243 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	SPATA31C1	P0DKV0	1188 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	TEC	P42680	631 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	CRYBB1	P53674	252 aa	Predicted RBP	18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	CYP4A11	Q02928	519 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	PDIA5	Q14554	519 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	PLA2G4F	Q68DD2	849 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908		Q7L0L9	218 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	OTUD6A	Q7L8S5	288 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	TPH2	Q8IWU9	490 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	LRRC71	Q8N4P6	559 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	IGSF22	Q8N9C0	903 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	ADAMTS10	Q9H324	1103 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	SEMA6B	Q9H3T3	888 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	DHX33	Q9H6R0	707 aa	Known RBP	18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	CDHR5	Q9HBB8	845 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	TUFT1	Q9NNX1	390 aa		18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	YBX2	Q9Y2T7	364 aa	Known RBP	18.19	■□□□□ 0.5
ERBB2-222	ENST00000584908	CDH23	Q9H251	3354 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	GJB5	O95377	273 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	VTN	P04004	478 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	XRCC6	P12956	609 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	SYT1	P21579	422 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	MUT	P22033	750 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	CD52	P31358	61 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	RFC5	P40937	340 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	NPEPPS	P55786	919 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	CDC42EP1	Q00587	391 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	TMEM266	Q2M3C6	531 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	ZNF579	Q8NAF0	562 aa	Known RBP	18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	TMEM40	Q8WWA1	233 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	CEP170P1	Q96L14	293 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	SH2D3A	Q9BRG2	576 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	FTHL17	Q9BXU8	183 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	SUGCT	Q9HAC7	445 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	ANKEF1	Q9NU02	776 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	PADI3	Q9ULW8	664 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	AKT3	Q9Y243	479 aa		18.18	■□□□□ 0.5
ERBB2-222	ENST00000584908	COL4A6	Q14031	1691 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	MYO9B	Q13459	2157 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	ZBTB39	O15060	712 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	GAS2	O43903	313 aa	Known RBP	18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	AMH	P03971	560 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	RPA1	P27694	616 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	DNM2	P50570	870 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	RABGGTB	P53611	331 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	ATP2C1	P98194	919 aa	Predicted RBP	18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	DRP2	Q13474	957 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	KIZ	Q2M2Z5	673 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	CATSPER3	Q86XQ3	398 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	HSCB	Q8IWL3	235 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	ERMN	Q8TAM6	284 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	SLC7A3	Q8WY07	619 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	TOP1MT	Q969P6	601 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	ERVK-5	Q9HDB9	667 aa		18.17	■□□□□ 0.5
ERBB2-222	ENST00000584908	MED24	O75448	989 aa		18.16	■□□□□ 0.5
ERBB2-222	ENST00000584908	GPC3	P51654	580 aa		18.16	■□□□□ 0.5
ERBB2-222	ENST00000584908	NLRP11	P59045	1033 aa	Known RBP	18.16	■□□□□ 0.5
ERBB2-222	ENST00000584908	PAK2	Q13177	524 aa		18.16	■□□□□ 0.5
ERBB2-222	ENST00000584908	ODR4	Q5SWX8	454 aa		18.16	■□□□□ 0.5
ERBB2-222	ENST00000584908	OSMR	Q99650	979 aa		18.16	■□□□□ 0.5
ERBB2-222	ENST00000584908	ZNF576	Q9H609	170 aa		18.16	■□□□□ 0.5
ERBB2-222	ENST00000584908	NOC2L	Q9Y3T9	749 aa	Known RBP	18.16	■□□□□ 0.5
ERBB2-222	ENST00000584908	STK24	Q9Y6E0	443 aa		18.16	■□□□□ 0.5
ERBB2-222	ENST00000584908	VPS37C	A5D8V6	355 aa	Predicted RBP	18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	ENPP3	O14638	875 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	RPS6KA5	O75582	802 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	MYOG	P15173	224 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	EIF4B	P23588	611 aa	Known RBP	18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	RARRES1	P49788	294 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	HTRA4	P83105	476 aa	Predicted RBP	18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	IL17A	Q16552	155 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	XKR9	Q5GH70	373 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	ARL6IP4	Q66PJ3	421 aa	Known RBP	18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	HAUS3	Q68CZ6	603 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	CRIPAK	Q8N1N5	446 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	LINC01599	Q8WXQ3	324 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	GUCD1	Q96NT3	240 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	RAD9A	Q99638	391 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	RAB34	Q9BZG1	259 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	NKX2-4	Q9H2Z4	354 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	TMX1	Q9H3N1	280 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	SLC28A3	Q9HAS3	691 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	LRWD1	Q9UFC0	647 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	DBR1	Q9UK59	544 aa	Known RBP	18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	GINS2	Q9Y248	185 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	COL6A3	P12111	3177 aa		18.15	■□□□□ 0.5
ERBB2-222	ENST00000584908	MYH15	Q9Y2K3	1946 aa		18.14	■□□□□ 0.49
ERBB2-222	ENST00000584908	GPR182	O15218	404 aa		18.14	■□□□□ 0.49
ERBB2-222	ENST00000584908	TLL1	O43897	1013 aa		18.14	■□□□□ 0.49
ERBB2-222	ENST00000584908	POLG	P54098	1239 aa	Predicted RBP	18.14	■□□□□ 0.49
ERBB2-222	ENST00000584908	DTHD1	Q6ZMT9	781 aa		18.14	■□□□□ 0.49
ERBB2-222	ENST00000584908	TMCO2	Q7Z6W1	182 aa	Predicted RBP	18.14	■□□□□ 0.49
ERBB2-222	ENST00000584908	RTN4RL1	Q86UN2	441 aa	Predicted RBP	18.14	■□□□□ 0.49
ERBB2-222	ENST00000584908	ZNF410	Q86VK4	478 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms