RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 FAM228AQ86W67 206 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 FAM178BQ8IXR5 827 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 BLIDQ8IZY5 108 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 KLHL23Q8NBE8 558 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 KHSRPQ92945 711 aaKnown RBP eCLIP23.07■■□□□ 1.28
TOP3A-219ENST00000584887 ZNF274Q96GC6 653 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-219ENST00000584887 ZNF668Q96K58 619 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-219ENST00000584887 SCLT1Q96NL6 688 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 AIFM3Q96NN9 605 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 RIT2Q99578 217 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 C22orf23Q9BZE7 217 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 UNC45AQ9H3U1 944 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 C1orf112Q9NSG2 853 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 NRBP2Q9NSY0 501 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 ATG2AQ2TAZ0 1938 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 XIRP2A4UGR9 3374 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 KIAA1671Q9BY89 1806 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 MUC3AQ02505 3323 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 NCK2O43639 380 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 ZNF862O60290 1169 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 TDP2O95551 362 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 ITGB1P05556 798 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 TMOD1P28289 359 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 JAK3P52333 1124 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 GJD3Q8N144 294 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 SLC5A5Q92911 643 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 TM6SF1Q9BZW5 370 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 FAM50BQ9Y247 325 aa23.06■■□□□ 1.28
TOP3A-219ENST00000584887 GPR32O75388 356 aa23.05■■□□□ 1.28
TOP3A-219ENST00000584887 SFNP31947 248 aa23.05■■□□□ 1.28
TOP3A-219ENST00000584887 GTF2F1P35269 517 aaKnown RBP eCLIP23.05■■□□□ 1.28
TOP3A-219ENST00000584887 NLRP11P59045 1033 aaKnown RBP23.05■■□□□ 1.28
TOP3A-219ENST00000584887 SLC24A5Q71RS6 500 aa23.05■■□□□ 1.28
TOP3A-219ENST00000584887 MIER3Q7Z3K6 550 aa23.05■■□□□ 1.28
TOP3A-219ENST00000584887 P2RX5Q93086 422 aa23.05■■□□□ 1.28
TOP3A-219ENST00000584887 RGS18Q9NS28 235 aa23.05■■□□□ 1.28
TOP3A-219ENST00000584887 RNF216Q9NWF9 866 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-219ENST00000584887 C9IYK1 514 aa23.04■■□□□ 1.28
TOP3A-219ENST00000584887 DNAJB1P25685 340 aa23.04■■□□□ 1.28
TOP3A-219ENST00000584887 COL19A1Q14993 1142 aa23.04■■□□□ 1.28
TOP3A-219ENST00000584887 NAALADL2Q58DX5 795 aa23.04■■□□□ 1.28
TOP3A-219ENST00000584887 FAM102BQ5T8I3 360 aa23.04■■□□□ 1.28
TOP3A-219ENST00000584887 SPPL3Q8TCT6 385 aa23.04■■□□□ 1.28
TOP3A-219ENST00000584887 PPP2R3CQ969Q6 453 aa23.04■■□□□ 1.28
TOP3A-219ENST00000584887 ATP6V0A4Q9HBG4 840 aa23.04■■□□□ 1.28
TOP3A-219ENST00000584887 SEPT9Q9UHD8 586 aaPredicted RBP23.04■■□□□ 1.28
TOP3A-219ENST00000584887 WDR81Q562E7 1941 aa23.04■■□□□ 1.28
TOP3A-219ENST00000584887 FAM86C2PA6NEL3 165 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 FGFR1P11362 822 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 TBC1D8BQ0IIM8 1120 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 CAMK1Q14012 370 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 Q4G0T1 1027 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 TMEM31Q5JXX7 168 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 POF1BQ8WVV4 589 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 HCSTQ9UBK5 93 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 KCNJ14Q9UNX9 436 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 PCDHB12Q9Y5F1 795 aa23.03■■□□□ 1.28
TOP3A-219ENST00000584887 LINC01565O15544 149 aa23.02■■□□□ 1.28
TOP3A-219ENST00000584887 IRS1P35568 1242 aa23.02■■□□□ 1.28
TOP3A-219ENST00000584887 LTBRP36941 435 aa23.02■■□□□ 1.28
TOP3A-219ENST00000584887 DLX2Q07687 328 aaPredicted RBP23.02■■□□□ 1.28
TOP3A-219ENST00000584887 NONOQ15233 471 aaKnown RBP eCLIP23.02■■□□□ 1.28
TOP3A-219ENST00000584887 INF2Q27J81 1249 aa23.02■■□□□ 1.28
TOP3A-219ENST00000584887 MTERF2Q49AM1 385 aa23.02■■□□□ 1.28
TOP3A-219ENST00000584887 FAM43BQ6ZT52 329 aaPredicted RBP23.02■■□□□ 1.28
TOP3A-219ENST00000584887 DAGLBQ8NCG7 672 aa23.02■■□□□ 1.28
TOP3A-219ENST00000584887 AAASQ9NRG9 546 aa23.02■■□□□ 1.28
TOP3A-219ENST00000584887 DTNBO60941 627 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 PSMD10O75832 226 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 CDKL5O76039 1030 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 NDUFV1P49821 464 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 DSC3Q14574 896 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 CTC1Q2NKJ3 1217 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 GALNT17Q6IS24 598 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 KRT25Q7Z3Z0 450 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 ADGRD2Q7Z7M1 963 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 THNSL1Q8IYQ7 743 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 LINC01465Q8N7H1 131 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 RNF169Q8NCN4 708 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 MICAL1Q8TDZ2 1067 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 NLRP7Q8WX94 980 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 LRFN3Q9BTN0 628 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 SLKQ9H2G2 1235 aaPredicted RBP23.01■■□□□ 1.27
TOP3A-219ENST00000584887 ADAMTS10Q9H324 1103 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 TMEM161AQ9NX61 479 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 DDX25Q9UHL0 483 aaKnown RBP23.01■■□□□ 1.27
TOP3A-219ENST00000584887 PCDHGC5Q9Y5F6 944 aa23.01■■□□□ 1.27
TOP3A-219ENST00000584887 CCDC194A0A1B0GVG4 234 aa23■■□□□ 1.27
TOP3A-219ENST00000584887 TMEM150BA6NC51 233 aa23■■□□□ 1.27
TOP3A-219ENST00000584887 TBX10O75333 385 aa23■■□□□ 1.27
TOP3A-219ENST00000584887 ZSCAN20P17040 1043 aaPredicted RBP23■■□□□ 1.27
TOP3A-219ENST00000584887 EIF4BP23588 611 aaKnown RBP23■■□□□ 1.27
TOP3A-219ENST00000584887 NPY5RQ15761 445 aa23■■□□□ 1.27
TOP3A-219ENST00000584887 RBM23Q86U06 439 aaKnown RBP23■■□□□ 1.27
TOP3A-219ENST00000584887 RDM1Q8NG50 284 aa23■■□□□ 1.27
TOP3A-219ENST00000584887 TYW1Q9NV66 732 aaKnown RBP23■■□□□ 1.27
TOP3A-219ENST00000584887 FNDC1Q4ZHG4 1894 aaPredicted RBP23■■□□□ 1.27
TOP3A-219ENST00000584887 CYP3A7-CYP3A51PA0A087WV96 503 aa22.99■■□□□ 1.27
TOP3A-219ENST00000584887 M0R2N6 131 aa22.99■■□□□ 1.27
TOP3A-219ENST00000584887 FGFR4P22455 802 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms