RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 LRRC71Q8N4P6 559 aa13.77□□□□□ -0.21
CDK5R1-202ENST00000584716 LMBR1Q8WVP7 490 aa13.77□□□□□ -0.21
CDK5R1-202ENST00000584716 CEP89Q96ST8 783 aa13.77□□□□□ -0.21
CDK5R1-202ENST00000584716 BLZF1Q9H2G9 400 aa13.77□□□□□ -0.21
CDK5R1-202ENST00000584716 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
CDK5R1-202ENST00000584716 GTF2IRD1Q9UHL9 959 aa13.77□□□□□ -0.21
CDK5R1-202ENST00000584716 MAFO75444 373 aaPredicted RBP13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 DGAT1O75907 488 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 GNAT1P11488 350 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 CYP2C9P11712 490 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 COL6A1P12109 1028 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 CYP11B2P19099 503 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 PTMSP20962 102 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 RFC5P40937 340 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 AMPD3Q01432 767 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 PTGISQ16647 500 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 ARSHQ5FYA8 562 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 EFCAB12Q6NXP0 572 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 C1orf186Q6ZWK4 172 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 ERCC4Q92889 916 aaPredicted RBP13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 TMEM143Q96AN5 459 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 MTRQ99707 1265 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 TRPV6Q9H1D0 765 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 TNMDQ9H2S6 317 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 ZHX3Q9H4I2 956 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 ATP6V0A4Q9HBG4 840 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 TRMT13Q9NUP7 481 aaKnown RBP13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 KBTBD4Q9NVX7 518 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 TUBE1Q9UJT0 475 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
CDK5R1-202ENST00000584716 SFI1A8K8P3 1242 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 MAGEB2O15479 319 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 PQBP1O60828 265 aaKnown RBP13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 C22orf31O95567 290 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 MBD3O95983 291 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 PTPN11Q06124 597 aaPredicted RBP13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 PNOCQ13519 176 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 CUL4BQ13620 913 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 GIT2Q14161 759 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 EMC2Q15006 297 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 RUFY4Q6ZNE9 571 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 SLC43A3Q8NBI5 491 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 RETREG2Q8NC44 543 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 DDX12PQ92771 950 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 LRRC27Q9C0I9 530 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 FAM49AQ9H0Q0 323 aaPredicted RBP13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 DHX33Q9H6R0 707 aaKnown RBP13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 GPRC5CQ9NQ84 441 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 XPNPEP1Q9NQW7 623 aa13.75□□□□□ -0.21
CDK5R1-202ENST00000584716 MYH11P35749 1972 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 RSPH10B2B2RC85 870 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 B4GALT4O60513 344 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 HIP1RO75146 1068 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 RSPH10BP0C881 870 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 IDEP14735 1019 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 CAPN2P17655 700 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 DNM2P50570 870 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 CDK7P50613 346 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 CLCN3P51790 818 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 ASIC1P78348 528 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 ADAM17P78536 824 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 DRP2Q13474 957 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 SH3RF1Q7Z6J0 888 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 SESTD1Q86VW0 696 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 EXOC8Q8IYI6 725 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 DNAJB3Q8WWF6 145 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 CCDC34Q96HJ3 373 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 ZNF668Q96K58 619 aaPredicted RBP13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 PPP1R16BQ96T49 567 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 REEP2Q9BRK0 252 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 PDLIM7Q9NR12 457 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 AKT3Q9Y243 479 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 ATP11BQ9Y2G3 1177 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 PPME1Q9Y570 386 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 PCDHA2Q9Y5H9 948 aa13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 KIAA0100Q14667 2235 aaKnown RBP13.74□□□□□ -0.21
CDK5R1-202ENST00000584716 IGKV6-21A0A0C4DH24 114 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 GTPBP6O43824 516 aaPredicted RBP13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 TRAK2O60296 914 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 TMOD1P28289 359 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 MDM2Q00987 491 aaPredicted RBP13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 MLLT1Q03111 559 aaPredicted RBP13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 TMEM62Q0P6H9 643 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 POSTNQ15063 836 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 LRRC26Q2I0M4 334 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 TRIM60Q495X7 471 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 RHPN2Q8IUC4 686 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 C7orf25Q9BPX7 421 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 JPH2Q9BR39 696 aaPredicted RBP13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 TRIM9Q9C026 710 aa13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
CDK5R1-202ENST00000584716 NUP62CLQ9H1M0 184 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms