RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 SNX29Q8TEQ0 813 aa17.85■□□□□ 0.45
CSNK1D-223ENST00000584472 TIFAQ96CG3 184 aa17.85■□□□□ 0.45
CSNK1D-223ENST00000584472 VWCEQ96DN2 955 aa17.85■□□□□ 0.45
CSNK1D-223ENST00000584472 DYDC2Q96IM9 177 aa17.85■□□□□ 0.45
CSNK1D-223ENST00000584472 POLR3CQ9BUI4 534 aaPredicted RBP17.85■□□□□ 0.45
CSNK1D-223ENST00000584472 TUFT1Q9NNX1 390 aa17.85■□□□□ 0.45
CSNK1D-223ENST00000584472 NRBP2Q9NSY0 501 aa17.85■□□□□ 0.45
CSNK1D-223ENST00000584472 RGL1Q9NZL6 768 aa17.85■□□□□ 0.45
CSNK1D-223ENST00000584472 LOXHD1Q8IVV2 1947 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 A0A1W2PQ27 194 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 A0A1W2PQ64 194 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 A0A1W2PQD8 194 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 RSPH10B2B2RC85 870 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 PRPF40AO75400 957 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 MED24O75448 989 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 SLITRK3O94933 977 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 P4HBP07237 508 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 RSPH10BP0C881 870 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 SPATA31C1P0DKV0 1188 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 ACRP10323 421 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 CMA1P23946 247 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 RPA1P27694 616 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 CYP4A11Q02928 519 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 FAM26DQ5JW98 314 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 MTHFD1LQ6UB35 978 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 CABP7Q86V35 215 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 CATSPER3Q86XQ3 398 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 BANK1Q8NDB2 785 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 TRAPPC12Q8WVT3 735 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 PBX4Q9BYU1 374 aa17.84■□□□□ 0.45
CSNK1D-223ENST00000584472 SMIM35A0A1B0GVV1 85 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 GOLGA6L4A6NEF3 574 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 SLC26A4O43511 780 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 GADD45BO75293 160 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 C22orf31O95567 290 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 CXCL10P02778 98 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 ACTN1P12814 892 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 KLRC1P26715 233 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 CCT6AP40227 531 aaKnown RBP17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 CTTNQ14247 550 aaKnown RBP17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 MBTPS1Q14703 1052 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 ECM1Q16610 540 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 HYIQ5T013 277 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 LXNQ9BS40 222 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 NIFKQ9BYG3 293 aaKnown RBP17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 ZNF576Q9H609 170 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 WRAP73Q9P2S5 460 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 TET1Q8NFU7 2136 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 PRUNE2Q8WUY3 3088 aa17.83■□□□□ 0.44
CSNK1D-223ENST00000584472 ARID2Q68CP9 1835 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 KDM3AQ9Y4C1 1321 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 FAM237AA0A1B0GTK4 181 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 GOLGA6L22H0YM25 854 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 MAGEB2O15479 319 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 BAIAP3O94812 1187 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 STBD1O95210 358 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 MUTP22033 750 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 TXLNAP40222 546 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 GPNMBQ14956 572 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 KARSQ15046 597 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 TARBP2Q15633 366 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 TPRNQ4KMQ1 711 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 DEFB128Q7Z7B8 93 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 TPH2Q8IWU9 490 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 NME8Q8N427 588 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 PHOSPHO2Q8TCD6 241 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 DNAJB3Q8WWF6 145 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 MRPS27Q92552 414 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 CALML4Q96GE6 196 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 FAM161BQ96MY7 647 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 PNMA5Q96PV4 448 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 ZSWIM4Q9H7M6 989 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 LMBRD1Q9NUN5 540 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 FAM13BQ9NYF5 915 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 CXXC1Q9P0U4 656 aaPredicted RBP17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 MSRAQ9UJ68 235 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 SLC4A7Q9Y6M7 1214 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 CHD7Q9P2D1 2997 aa17.82■□□□□ 0.44
CSNK1D-223ENST00000584472 A0A1B0GVL5 298 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 NBNO60934 754 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 CTSHP09668 335 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 UBE2HP62256 183 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 MRPS6P82932 125 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 GRB10Q13322 594 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 IER5Q5VY09 327 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 OTOP2Q7RTS6 562 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 C4orf19Q8IY42 314 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 FSIP1Q8NA03 581 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 ZBTB10Q96DT7 871 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 FAM49AQ9H0Q0 323 aaPredicted RBP17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 CCDC39Q9UFE4 941 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 SEPT9Q9UHD8 586 aaPredicted RBP17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 HPSEQ9Y251 543 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 PPME1Q9Y570 386 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 PCDHA11Q9Y5I1 949 aa17.81■□□□□ 0.44
CSNK1D-223ENST00000584472 SIP14410 1827 aa17.8■□□□□ 0.44
CSNK1D-223ENST00000584472 A0A087X0B3 334 aa17.8■□□□□ 0.44
CSNK1D-223ENST00000584472 LYPLA2O95372 231 aa17.8■□□□□ 0.44
CSNK1D-223ENST00000584472 CHRNA1P02708 482 aa17.8■□□□□ 0.44
CSNK1D-223ENST00000584472 PFKFB1P16118 471 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms