RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 EPHA7Q15375 998 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 SAFBQ15424 915 aaKnown RBP eCLIP11.12□□□□□ -0.63
SKA2-208ENST00000583927 EFCAB12Q6NXP0 572 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 TMCO2Q7Z6W1 182 aaPredicted RBP11.12□□□□□ -0.63
SKA2-208ENST00000583927 C4orf19Q8IY42 314 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 EXOC8Q8IYI6 725 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 ZNF689Q96CS4 500 aaPredicted RBP11.12□□□□□ -0.63
SKA2-208ENST00000583927 C8orf76Q96K31 380 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 MAP7D2Q96T17 732 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 JPH2Q9BR39 696 aaPredicted RBP11.12□□□□□ -0.63
SKA2-208ENST00000583927 ERVK-5Q9HDB9 667 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 MTCH2Q9Y6C9 303 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 FAM205CA6NFA0 338 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 EPOPA6NHQ4 379 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 EML1O00423 815 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 GPR182O15218 404 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 NEMFO60524 1076 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 LPXNO60711 386 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 DTNBO60941 627 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 RPS6KA5O75582 802 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 TRAPPC10P48553 1259 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 MCM2P49736 904 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 TMEM62Q0P6H9 643 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 ANO5Q75V66 913 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 RTN4RL1Q86UN2 441 aaPredicted RBP11.11□□□□□ -0.63
SKA2-208ENST00000583927 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.11□□□□□ -0.63
SKA2-208ENST00000583927 METTL13Q8N6R0 699 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 LINC01599Q8WXQ3 324 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 CLP1Q92989 425 aaKnown RBP11.11□□□□□ -0.63
SKA2-208ENST00000583927 TBC1D32Q96NH3 1257 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 MTMR9Q96QG7 549 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 YME1L1Q96TA2 773 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 ADAMTS10Q9H324 1103 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 TMX1Q9H3N1 280 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 CDHR5Q9HBB8 845 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 PCDHA12Q9UN75 941 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 RWDD3Q9Y3V2 267 aa11.11□□□□□ -0.63
SKA2-208ENST00000583927 PLXNA4Q9HCM2 1894 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 MYH11P35749 1972 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 BDP1A6H8Y1 2624 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 C5orf67F2Z3F1 127 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
SKA2-208ENST00000583927 GAS2O43903 313 aaKnown RBP11.1□□□□□ -0.63
SKA2-208ENST00000583927 MAFO75444 373 aaPredicted RBP11.1□□□□□ -0.63
SKA2-208ENST00000583927 DGKIO75912 1065 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 LYPLA2O95372 231 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 RB1P06400 928 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 STAG3L1P0CL83 205 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 EIF4BP23588 611 aaKnown RBP11.1□□□□□ -0.63
SKA2-208ENST00000583927 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.63
SKA2-208ENST00000583927 SARSP49591 514 aaKnown RBP11.1□□□□□ -0.63
SKA2-208ENST00000583927 GPC3P51654 580 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 CLCN3P51790 818 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 NLRP11P59045 1033 aaKnown RBP11.1□□□□□ -0.63
SKA2-208ENST00000583927 CALCRLQ16602 461 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 KIZQ2M2Z5 673 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 NPAS4Q8IUM7 802 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 TMEM40Q8WWA1 233 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 ARNTL2Q8WYA1 636 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 DHX33Q9H6R0 707 aaKnown RBP11.1□□□□□ -0.63
SKA2-208ENST00000583927 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 RGS18Q9NS28 235 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 C1orf112Q9NSG2 853 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 SEPT9Q9UHD8 586 aaPredicted RBP11.1□□□□□ -0.63
SKA2-208ENST00000583927 ST3GAL5Q9UNP4 418 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 AKT3Q9Y243 479 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 NOC2LQ9Y3T9 749 aaKnown RBP11.1□□□□□ -0.63
SKA2-208ENST00000583927 KIF3AQ9Y496 699 aa11.1□□□□□ -0.63
SKA2-208ENST00000583927 ADGRA3Q8IWK6 1321 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 MARCH6O60337 910 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 UPP2O95045 317 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 VTNP04004 478 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 LINC00271P0C7V0 271 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 IGFBP4P22692 258 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 DNM2P50570 870 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 FAM189BP81408 668 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 GRB10Q13322 594 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 DSC3Q14574 896 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 EPC2Q52LR7 807 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 FAM117BQ6P1L5 589 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 SLC24A5Q71RS6 500 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 OTUD6AQ7L8S5 288 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 ZNF410Q86VK4 478 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 FAM228AQ86W67 206 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 NOSTRINQ8IVI9 506 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 CMTR2Q8IYT2 770 aaKnown RBP11.09□□□□□ -0.63
SKA2-208ENST00000583927 LRRC71Q8N4P6 559 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 FIBCD1Q8N539 461 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 FAM184AQ8NB25 1140 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 BANK1Q8NDB2 785 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 OSMRQ99650 979 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 HSD17B14Q9BPX1 270 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 LXNQ9BS40 222 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 ELAC1Q9H777 363 aaKnown RBP11.09□□□□□ -0.63
SKA2-208ENST00000583927 ZSWIM4Q9H7M6 989 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 TTC12Q9H892 705 aaPredicted RBP11.09□□□□□ -0.63
SKA2-208ENST00000583927 CYP26B1Q9NR63 512 aa11.09□□□□□ -0.63
SKA2-208ENST00000583927 C5orf42Q9H799 3197 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms