RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CNKSR3Q6P9H4 555 aa7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 CXorf67Q86X51 503 aaPredicted RBP7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 FAM129CQ86XR2 697 aa7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 TTLL6Q8N841 843 aa7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 LINC00482Q8N8I6 264 aa7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 CALML6Q8TD86 181 aa7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 FERMT2Q96AC1 680 aa7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 PWWP2AQ96N64 755 aa7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 KRTAP4-9Q9BYQ8 210 aa7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 USP36Q9P275 1121 aaKnown RBP7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 KCNG1Q9UIX4 513 aa7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 CNOT6Q9ULM6 557 aaKnown RBP7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 G3BP2Q9UN86 482 aaKnown RBP7.57□□□□□ -1.2
SMARCE1-219ENST00000583294 ALDH1L1O75891 902 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 LINC00310P59036 64 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 ADCY2Q08462 1091 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 NOLC1Q14978 699 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 ODR4Q5SWX8 454 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 CCDC62Q6P9F0 684 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 UNQ6494/PRO21346Q6UXR6 183 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 CBARPQ8N350 705 aaPredicted RBP7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 FNIP1Q8TF40 1166 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 MENTQ9BUN1 341 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 BTBD2Q9BX70 525 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 KLHL42Q9P2K6 505 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 KCTD3Q9Y597 815 aa7.56□□□□□ -1.2
SMARCE1-219ENST00000583294 TNKSO95271 1327 aa7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 PRSS38A1L453 326 aa7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 NUAK1O60285 661 aa7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 H2AFYO75367 372 aaKnown RBP7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 IL13RA1P78552 427 aa7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 ZBTB41Q5SVQ8 909 aa7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 PGM2L1Q6PCE3 622 aa7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 LMBR1Q8WVP7 490 aa7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 OR10A5Q9H207 317 aa7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 SPATA6Q9NWH7 488 aaPredicted RBP7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 PPP2R3BQ9Y5P8 575 aa7.55□□□□□ -1.2
SMARCE1-219ENST00000583294 K7ESF4 209 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 APEX1P27695 318 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 ADCY8P40145 1251 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 MANFP55145 182 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 MLLT6P55198 1093 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 HTRA3P83110 453 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 CD83Q01151 205 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 TTF1Q15361 905 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 PTPN21Q16825 1174 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 WDR72Q3MJ13 1102 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 KIAA1841Q6NSI8 718 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 TRMT10BQ6PF06 316 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 DPP8Q6V1X1 898 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 EAF2Q96CJ1 260 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 WRNIP1Q96S55 665 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 KCND1Q9NSA2 647 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 MAGEL2Q9UJ55 1249 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 EDARQ9UNE0 448 aa7.54□□□□□ -1.2
SMARCE1-219ENST00000583294 ST20-MTHFSA0A0A6YYL1 179 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 PCDH8O95206 1070 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 LPLP06858 475 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 GPR3P46089 330 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 MOGSQ13724 837 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 CLUL1Q15846 466 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 UGT8Q16880 541 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 INAVAQ3KP66 663 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 RAVER1Q8IY67 606 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 JDP2Q8WYK2 163 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 ACAP3Q96P50 834 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 PRDM12Q9H4Q4 367 aa7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 THRAP3Q9Y2W1 955 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-219ENST00000583294 IL13P35225 146 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 PCBP2Q15366 365 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 STILQ15468 1287 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 FSCN1Q16658 493 aaKnown RBP7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 RGL3Q3MIN7 710 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 KANK2Q63ZY3 851 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 LILRA6Q6PI73 481 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 TTLL10Q6ZVT0 673 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 KANSL1Q7Z3B3 1105 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 ADGRG2Q8IZP9 1017 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 ZNF526Q8TF50 670 aaPredicted RBP7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 RPGRQ92834 1020 aaKnown RBP7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 FUBP3Q96I24 572 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 FAXDC2Q96IV6 333 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 QRSL1Q9H0R6 528 aaKnown RBP7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 MKS1Q9NXB0 559 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 USP18Q9UMW8 372 aa7.52□□□□□ -1.21
SMARCE1-219ENST00000583294 SHTN1A0MZ66 631 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 H0Y858 1186 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 RFXAPO00287 272 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 DDX3XO00571 662 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 CYP7B1O75881 506 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 KNG1P01042 644 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 ENPP1P22413 925 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 CCND1P24385 295 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 NEK2P51955 445 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 PITRM1Q5JRX3 1037 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 TOR2AQ5JU69 321 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 TTLL7Q6ZT98 887 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 ZBTB46Q86UZ6 589 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 AMOTL1Q8IY63 956 aa7.51□□□□□ -1.21
SMARCE1-219ENST00000583294 C1orf162Q8NEQ5 155 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms