RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 TMEM266Q2M3C6 531 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 FAM117BQ6P1L5 589 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 HSCBQ8IWL3 235 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 C4orf19Q8IY42 314 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 MYOCDQ8IZQ8 938 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 USP38Q8NB14 1042 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 NEK9Q8TD19 979 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 GBF1Q92538 1859 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 CEP170P1Q96L14 293 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 TTYH1Q9H313 450 aaPredicted RBP14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 SEMA6BQ9H3T3 888 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 AGO3Q9H9G7 860 aaKnown RBP14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 SLC28A3Q9HAS3 691 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 CYP26B1Q9NR63 512 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 MTMR10Q9NXD2 777 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 KDM3AQ9Y4C1 1321 aa14.11□□□□□ -0.15
SMARCE1-218ENST00000582955 TLL1O43897 1013 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 SLITRK3O94933 977 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 DNM2P50570 870 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 POLGP54098 1239 aaPredicted RBP14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 PTGDRQ13258 359 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 RILPL1Q5EBL4 403 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 XKR9Q5GH70 373 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 PPP2R2DQ66LE6 453 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 OTUD6AQ7L8S5 288 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 LINC01465Q8N7H1 131 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 SNX21Q969T3 373 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 INTS4Q96HW7 963 aaKnown RBP14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 ZNF668Q96K58 619 aaPredicted RBP14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 CCDC43Q96MW1 224 aaKnown RBP14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 SCLT1Q96NL6 688 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 OSMRQ99650 979 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 JPH2Q9BR39 696 aaPredicted RBP14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 ZNF576Q9H609 170 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 CDHR5Q9HBB8 845 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 PADI3Q9ULW8 664 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 SQORQ9Y6N5 450 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 MICAL3Q7RTP6 2002 aa14.1□□□□□ -0.15
SMARCE1-218ENST00000582955 MAFO75444 373 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 RPS6KA5O75582 802 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 UPP2O95045 317 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 CA3P07451 260 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 CRYBB1P53674 252 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 NLRP11P59045 1033 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 NFX1Q12986 1120 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 DRP2Q13474 957 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 ZNF579Q8NAF0 562 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 ERMNQ8TAM6 284 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 TMEM40Q8WWA1 233 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 SLC7A3Q8WY07 619 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 CEP89Q96ST8 783 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 HSD17B14Q9BPX1 270 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 NOC2LQ9Y3T9 749 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 PTPRSQ13332 1948 aa14.09□□□□□ -0.15
SMARCE1-218ENST00000582955 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 LAD1O00515 517 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 ZBTB39O15060 712 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 GPR32O75388 356 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 GJB5O95377 273 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 RFC5P40937 340 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 GPC3P51654 580 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 ODR4Q5SWX8 454 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 FERMT3Q86UX7 667 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 C4orf32Q8N8J7 132 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 NLRP7Q8WX94 980 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 GUCD1Q96NT3 240 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 FTHL17Q9BXU8 183 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 PPME1Q9Y570 386 aa14.08□□□□□ -0.16
SMARCE1-218ENST00000582955 LOXHD1Q8IVV2 1947 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 IGKV6-21A0A0C4DH24 114 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 GPR182O15218 404 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 MED24O75448 989 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 LYPLA2O95372 231 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 HSP90AA1P07900 732 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 IBSPP21815 317 aaPredicted RBP14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 GRIN2CQ14957 1233 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 HAUS3Q68CZ6 603 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 CATSPER3Q86XQ3 398 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 RHPN2Q8IUC4 686 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 EXOC8Q8IYI6 725 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 ZNF710Q8N1W2 664 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 PIGOQ8TEQ8 1089 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 CDX2Q99626 313 aaPredicted RBP14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 RAD9AQ99638 391 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 RAB34Q9BZG1 259 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 ADAMTS10Q9H324 1103 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 ERVK-5Q9HDB9 667 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 TUFT1Q9NNX1 390 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 ANKEF1Q9NU02 776 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 LRWD1Q9UFC0 647 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 ST3GAL5Q9UNP4 418 aa14.07□□□□□ -0.16
SMARCE1-218ENST00000582955 A0A087WWV3 80 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 LCHNA4D1U4 455 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms