RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 NEK9Q8TD19 979 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 MAP7D2Q96T17 732 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 ADAMTS10Q9H324 1103 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 CDHR5Q9HBB8 845 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 RGL1Q9NZL6 768 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 WRAP73Q9P2S5 460 aaPredicted RBP15.66■□□□□ 0.1
GGA3-215ENST00000582821 NOL7Q9UMY1 257 aaKnown RBP15.66■□□□□ 0.1
GGA3-215ENST00000582821 SMC3Q9UQE7 1217 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 INSL6Q9Y581 213 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 VTNP04004 478 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 TOB1P50616 345 aaPredicted RBP15.65■□□□□ 0.1
GGA3-215ENST00000582821 CLCN3P51790 818 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 TAP1Q03518 808 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 PAK2Q13177 524 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 ZNF174Q15697 407 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 MTERF2Q49AM1 385 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 TTC38Q5R3I4 469 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 OTUD6AQ7L8S5 288 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 LRRC71Q8N4P6 559 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 C4orf32Q8N8J7 132 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 MYLIPQ8WY64 445 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 DYDC2Q96IM9 177 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 EIF2AK1Q9BQI3 630 aaKnown RBP15.65■□□□□ 0.1
GGA3-215ENST00000582821 JPH2Q9BR39 696 aaPredicted RBP15.65■□□□□ 0.1
GGA3-215ENST00000582821 LXNQ9BS40 222 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 SUGCTQ9HAC7 445 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 ERVK-5Q9HDB9 667 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 CYP26B1Q9NR63 512 aa15.65■□□□□ 0.1
GGA3-215ENST00000582821 NOC2LQ9Y3T9 749 aaKnown RBP15.65■□□□□ 0.1
GGA3-215ENST00000582821 TMEM150BA6NC51 233 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 GPR182O15218 404 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 RPS6KA5O75582 802 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 OR52Z1P0C646 297 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 XRCC6P12956 609 aaKnown RBP eCLIP15.64■□□□□ 0.09
GGA3-215ENST00000582821 YWHABP31946 246 aaKnown RBP15.64■□□□□ 0.09
GGA3-215ENST00000582821 DNM2P50570 870 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 NLRP11P59045 1033 aaKnown RBP15.64■□□□□ 0.09
GGA3-215ENST00000582821 KIZQ2M2Z5 673 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 CRIPAKQ8N1N5 446 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 SP7Q8TDD2 431 aaPredicted RBP15.64■□□□□ 0.09
GGA3-215ENST00000582821 TMEM40Q8WWA1 233 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 TSPYL2Q9H2G4 693 aaPredicted RBP15.64■□□□□ 0.09
GGA3-215ENST00000582821 TMX1Q9H3N1 280 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 PRDM12Q9H4Q4 367 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 DHX33Q9H6R0 707 aaKnown RBP15.64■□□□□ 0.09
GGA3-215ENST00000582821 AKT3Q9Y243 479 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 PRUNE2Q8WUY3 3088 aa15.64■□□□□ 0.09
GGA3-215ENST00000582821 LCHNA4D1U4 455 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 ARHGEF15O94989 841 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 EIF4BP23588 611 aaKnown RBP15.63■□□□□ 0.09
GGA3-215ENST00000582821 GPC3P51654 580 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 NPEPPSP55786 919 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 CTTNQ14247 550 aaKnown RBP15.63■□□□□ 0.09
GGA3-215ENST00000582821 LARP1BQ659C4 914 aaKnown RBP15.63■□□□□ 0.09
GGA3-215ENST00000582821 TPH2Q8IWU9 490 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 LINC01599Q8WXQ3 324 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 CEP170P1Q96L14 293 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 OSMRQ99650 979 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 SH2D3AQ9BRG2 576 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 ST3GAL5Q9UNP4 418 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 GINS2Q9Y248 185 aa15.63■□□□□ 0.09
GGA3-215ENST00000582821 EYSQ5T1H1 3165 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 PRRC2BQ5JSZ5 2229 aaKnown RBP15.62■□□□□ 0.09
GGA3-215ENST00000582821 LINC01553A4QN01 128 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 FOSL2P15408 326 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 POU3F3P20264 500 aaPredicted RBP15.62■□□□□ 0.09
GGA3-215ENST00000582821 RFC5P40937 340 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 ERVK-21P61565 698 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 CYP4A11Q02928 519 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 NFX1Q12986 1120 aaKnown RBP15.62■□□□□ 0.09
GGA3-215ENST00000582821 DRP2Q13474 957 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 TMEM266Q2M3C6 531 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 RILPL1Q5EBL4 403 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 PLA2G4FQ68DD2 849 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 FAM117BQ6P1L5 589 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 FAM228AQ86W67 206 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 ZNF579Q8NAF0 562 aaKnown RBP15.62■□□□□ 0.09
GGA3-215ENST00000582821 GAS2L1Q99501 681 aaPredicted RBP15.62■□□□□ 0.09
GGA3-215ENST00000582821 ANKEF1Q9NU02 776 aa15.62■□□□□ 0.09
GGA3-215ENST00000582821 COL4A6Q14031 1691 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 POTEMA6NI47 508 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 H3BQV1 296 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 LAD1O00515 517 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 ZBTB39O15060 712 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 GAS2O43903 313 aaKnown RBP15.61■□□□□ 0.09
GGA3-215ENST00000582821 UPP2O95045 317 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 SPATA31C1P0DKV0 1188 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 DARSP14868 501 aaKnown RBP15.61■□□□□ 0.09
GGA3-215ENST00000582821 TECP42680 631 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
GGA3-215ENST00000582821 ADGRE1Q14246 886 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 PDIA5Q14554 519 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 ZNF410Q86VK4 478 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 SLC7A3Q8WY07 619 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 INTS4Q96HW7 963 aaKnown RBP15.61■□□□□ 0.09
GGA3-215ENST00000582821 TGS1Q96RS0 853 aaKnown RBP15.61■□□□□ 0.09
GGA3-215ENST00000582821 POLR3CQ9BUI4 534 aaPredicted RBP15.61■□□□□ 0.09
GGA3-215ENST00000582821 RC3H2Q9HBD1 1191 aaKnown RBP15.61■□□□□ 0.09
GGA3-215ENST00000582821 TUFT1Q9NNX1 390 aa15.61■□□□□ 0.09
GGA3-215ENST00000582821 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms