RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 PDE1AP54750 535 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 KRT76Q01546 638 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 PLCB3Q01970 1234 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 ITIH3Q06033 890 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 TMEM266Q2M3C6 531 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 C6orf132Q5T0Z8 1188 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 FAM102BQ5T8I3 360 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 DGLUCYQ7Z3D6 616 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 ZDHHC14Q8IZN3 488 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 NME8Q8N427 588 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 FLCNQ8NFG4 579 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 SMARCC2Q8TAQ2 1214 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 KCNG4Q8TDN1 519 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 CUL5Q93034 780 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 RMDN1Q96DB5 314 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 CDHR1Q96JP9 859 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 ADAM2Q99965 735 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 CNNM2Q9H8M5 875 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 C1orf112Q9NSG2 853 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 PPP4R2Q9NY27 417 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 LIMD1Q9UGP4 676 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 RABGEF1Q9UJ41 708 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 CDH22Q9UJ99 828 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 PCDHB15Q9Y5E8 787 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 KDM3AQ9Y4C1 1321 aa8.75□□□□□ -1.01
CCDC47-205ENST00000582331 DENND3A2RUS2 1198 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 PI15O43692 258 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 KCNA2P16389 499 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 KRT17Q04695 432 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 GRM4Q14833 912 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 ANGPT1Q15389 498 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 SEC23AQ15436 765 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 IMMTQ16891 758 aaKnown RBP8.74□□□□□ -1.01
CCDC47-205ENST00000582331 SLC35G1Q2M3R5 365 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 ODR4Q5SWX8 454 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 SLC24A5Q71RS6 500 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 TMC7Q7Z402 723 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 CCDC105Q8IYK2 499 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 TDRD5Q8NAT2 981 aaKnown RBP8.74□□□□□ -1.01
CCDC47-205ENST00000582331 RILPL2Q969X0 211 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 GPRASP2Q96D09 838 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 SEMA4AQ9H3S1 761 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 CWH43Q9H720 699 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 ATP6V0A4Q9HBG4 840 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 ERVK-5Q9HDB9 667 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 RGS18Q9NS28 235 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 DMXL1Q9Y485 3027 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 WDR87Q6ZQQ6 2873 aa8.74□□□□□ -1.01
CCDC47-205ENST00000582331 RIF1Q5UIP0 2472 aaKnown RBP8.73□□□□□ -1.01
CCDC47-205ENST00000582331 SMIM35A0A1B0GVV1 85 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 C9IYK1 514 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 CYTH3O43739 400 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 MGEA5O60502 916 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 RPS6KA5O75582 802 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 LMNAP02545 664 aaKnown RBP8.73□□□□□ -1.01
CCDC47-205ENST00000582331 AOC1P19801 751 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 SDSP20132 328 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 FAM189BP81408 668 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 PUM1Q14671 1186 aaKnown RBP eCLIP8.73□□□□□ -1.012e-6■□□□□ 10.8
CCDC47-205ENST00000582331 SMC1AQ14683 1233 aaKnown RBP8.73□□□□□ -1.01
CCDC47-205ENST00000582331 ATAT1Q5SQI0 421 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 CWF19L1Q69YN2 538 aaKnown RBP8.73□□□□□ -1.01
CCDC47-205ENST00000582331 USP17L6PQ6QN14 398 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 KCNT2Q6UVM3 1135 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 MRPL43Q8N983 215 aaKnown RBP8.73□□□□□ -1.01
CCDC47-205ENST00000582331 DTWD2Q8NBA8 298 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 TRAPPC12Q8WVT3 735 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 DDX12PQ92771 950 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 RTP3Q9BQQ7 232 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 AZI2Q9H6S1 392 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 TMEM161AQ9NX61 479 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 PKD2L1Q9P0L9 805 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 GINS2Q9Y248 185 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 USTQ9Y2C2 406 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 NOC2LQ9Y3T9 749 aaKnown RBP8.73□□□□□ -1.01
CCDC47-205ENST00000582331 HCFC2Q9Y5Z7 792 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 FAM186AA6NE01 2351 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 MYO10Q9HD67 2058 aa8.73□□□□□ -1.01
CCDC47-205ENST00000582331 FNDC1Q4ZHG4 1894 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-205ENST00000582331 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 MEIS2O14770 477 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 GPR182O15218 404 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 MAFGO15525 162 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 CLASP2O75122 1294 aaKnown RBP8.72□□□□□ -1.01
CCDC47-205ENST00000582331 KRT37O76014 449 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 WEE2P0C1S8 567 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 FGFR1P11362 822 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 NPR3P17342 541 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 ITGB5P18084 799 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 PPM1AP35813 382 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 MTMR1Q13613 665 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 BMS1Q14692 1282 aaKnown RBP8.72□□□□□ -1.01
CCDC47-205ENST00000582331 PLCB4Q15147 1175 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 RARS2Q5T160 578 aaKnown RBP8.72□□□□□ -1.01
CCDC47-205ENST00000582331 KIAA1841Q6NSI8 718 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 MTHFD1LQ6UB35 978 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 CWC27Q6UX04 472 aaKnown RBP8.72□□□□□ -1.01
CCDC47-205ENST00000582331 CYB5R4Q7L1T6 521 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 KIAA2013Q8IYS2 634 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 PIBF1Q8WXW3 757 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms