RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ZNF710Q8N1W2 664 aa24.88■■□□□ 1.57
CCDC47-204ENST00000582252 SMCR8Q8TEV9 937 aaPredicted RBP24.88■■□□□ 1.57
CCDC47-204ENST00000582252 TLL2Q9Y6L7 1015 aa24.88■■□□□ 1.57
CCDC47-204ENST00000582252 SFI1A8K8P3 1242 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 KRT86O43790 486 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 DKC1O60832 514 aaKnown RBP eCLIP24.87■■□□□ 1.57
CCDC47-204ENST00000582252 AFPP02771 609 aaKnown RBP24.87■■□□□ 1.57
CCDC47-204ENST00000582252 PSMC5P62195 406 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 KCNMA1Q12791 1236 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 KCNH2Q12809 1159 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 FSTL1Q12841 308 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 ZNF746Q6NUN9 644 aaPredicted RBP24.87■■□□□ 1.57
CCDC47-204ENST00000582252 PDXDC1Q6P996 788 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 RRAGAQ7L523 313 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 ZNF720Q7Z2F6 126 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 TXLNBQ8N3L3 684 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 SYN2Q92777 582 aaPredicted RBP24.87■■□□□ 1.57
CCDC47-204ENST00000582252 LSM14BQ9BX40 385 aaKnown RBP24.87■■□□□ 1.57
CCDC47-204ENST00000582252 TSGA10Q9BZW7 698 aa24.87■■□□□ 1.57
CCDC47-204ENST00000582252 LARSQ9P2J5 1176 aaKnown RBP24.87■■□□□ 1.57
CCDC47-204ENST00000582252 CTAGE9A4FU28 777 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 HIP1RO75146 1068 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 NMT1P30419 496 aaKnown RBP24.86■■□□□ 1.57
CCDC47-204ENST00000582252 ARHGAP25P42331 645 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 SENP7Q9BQF6 1050 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 MKNK1Q9BUB5 465 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 DEF6Q9H4E7 631 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 CGNQ9P2M7 1197 aaKnown RBP24.86■■□□□ 1.57
CCDC47-204ENST00000582252 MRFAP1Q9Y605 127 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 BTBD19C9JJ37 291 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 FANCGO15287 622 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 ERCC3P19447 782 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 CHST13Q8NET6 341 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 BAP1Q92560 729 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 ANKEF1Q9NU02 776 aa24.86■■□□□ 1.57
CCDC47-204ENST00000582252 REXO2Q9Y3B8 237 aaKnown RBP24.86■■□□□ 1.57
CCDC47-204ENST00000582252 TMEM88BA6NKF7 163 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 LRRC53A6NM62 1247 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 PDHXO00330 501 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 YY1P25490 414 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 RARRES1P49788 294 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 SLC17A8Q8NDX2 589 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 INPP4AQ96PE3 977 aaPredicted RBP24.85■■□□□ 1.57
CCDC47-204ENST00000582252 SPATC1LQ9H0A9 340 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 PDCL3Q9H2J4 239 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 CYP39A1Q9NYL5 469 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 BTBD7Q9P203 1132 aa24.85■■□□□ 1.57
CCDC47-204ENST00000582252 ZMYM2Q9UBW7 1377 aa24.84■■□□□ 1.57
CCDC47-204ENST00000582252 MANSC4A6NHS7 340 aaPredicted RBP24.84■■□□□ 1.57
CCDC47-204ENST00000582252 EPHB6O15197 1021 aa24.84■■□□□ 1.57
CCDC47-204ENST00000582252 YWHABP31946 246 aaKnown RBP24.84■■□□□ 1.57
CCDC47-204ENST00000582252 PSMC2P35998 433 aaKnown RBP24.84■■□□□ 1.57
CCDC47-204ENST00000582252 HSP90AA2PQ14568 343 aaPredicted RBP24.84■■□□□ 1.57
CCDC47-204ENST00000582252 GNPTABQ3T906 1256 aa24.84■■□□□ 1.57
CCDC47-204ENST00000582252 RIOX2Q8IUF8 465 aa24.84■■□□□ 1.57
CCDC47-204ENST00000582252 SMAP1Q8IYB5 467 aaPredicted RBP24.84■■□□□ 1.57
CCDC47-204ENST00000582252 JAKMIP2Q96AA8 810 aa24.84■■□□□ 1.57
CCDC47-204ENST00000582252 HHIPL1Q96JK4 782 aa24.84■■□□□ 1.57
CCDC47-204ENST00000582252 DRC1Q96MC2 740 aa24.84■■□□□ 1.57
CCDC47-204ENST00000582252 FIZ1Q96SL8 496 aa24.84■■□□□ 1.57
CCDC47-204ENST00000582252 NAPGQ99747 312 aaPredicted RBP24.84■■□□□ 1.57
CCDC47-204ENST00000582252 GBP3Q9H0R5 595 aa24.84■■□□□ 1.57
CCDC47-204ENST00000582252 ABT1Q9ULW3 272 aaKnown RBP24.84■■□□□ 1.57
CCDC47-204ENST00000582252 TGFB1I1O43294 461 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 SLC10A3P09131 477 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 COPB2P35606 906 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 MYBPC2Q14324 1141 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 CCDC122Q5T0U0 273 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 SLC35F6Q8N357 371 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 PDCL2Q8N4E4 241 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 PAGR1Q9BTK6 254 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 IRX2Q9BZI1 471 aaPredicted RBP24.83■■□□□ 1.57
CCDC47-204ENST00000582252 TMEM206Q9H813 350 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 FBXO40Q9UH90 709 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 NFASCO94856 1347 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 A0A0U1RQJ8 604 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 SSU72P8A0A1W2PR75 194 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 EFCAB8A8MWE9 144 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 USO1O60763 962 aaKnown RBP24.83■■□□□ 1.57
CCDC47-204ENST00000582252 AKAP3O75969 853 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 SFMBT2Q5VUG0 894 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 CCDC155Q8N6L0 562 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 ATRIPQ8WXE1 791 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 CCDC102AQ96A19 550 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 IWS1Q96ST2 819 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 MOV10L1Q9BXT6 1211 aaKnown RBP24.83■■□□□ 1.57
CCDC47-204ENST00000582252 POLD4Q9HCU8 107 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 PLCB1Q9NQ66 1216 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 A1CFQ9NQ94 594 aaKnown RBP24.83■■□□□ 1.57
CCDC47-204ENST00000582252 GUCA1BQ9UMX6 200 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 FRMD4BQ9Y2L6 1034 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 PCDHA10Q9Y5I2 948 aa24.83■■□□□ 1.57
CCDC47-204ENST00000582252 KIAA1217Q5T5P2 1943 aa24.83■■□□□ 1.56
CCDC47-204ENST00000582252 CLIC2O15247 247 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 ATP9AO75110 1047 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 VAV2P52735 878 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 MAPK7Q13164 816 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 MAPK8IP2Q13387 824 aaPredicted RBP24.82■■□□□ 1.56
CCDC47-204ENST00000582252 SLC9C1Q4G0N8 1177 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 ZC2HC1CQ53FD0 456 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms