RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PVALEFA0A1B0GWK0 134 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 A6NJR5 290 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 AP5Z1O43299 807 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
SRSF1-204ENST00000581979 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.17
SRSF1-204ENST00000581979 TXNP10599 105 aaKnown RBP13.96□□□□□ -0.17
SRSF1-204ENST00000581979 IDEP14735 1019 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
SRSF1-204ENST00000581979 PSMC6P62333 389 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 KRT76Q01546 638 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 PPIGQ13427 754 aaKnown RBP eCLIP13.96□□□□□ -0.175e-26■■□□□ 13.2
SRSF1-204ENST00000581979 NCAPHQ15003 741 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 CNNM4Q6P4Q7 775 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 CCDC62Q6P9F0 684 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 GPBP1Q86WP2 473 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 TMEM199Q8N511 208 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 OR6J1Q8NGC5 347 aa13.96□□□□□ -0.17
SRSF1-204ENST00000581979 GTPBP4Q9BZE4 634 aaKnown RBP13.96□□□□□ -0.17
SRSF1-204ENST00000581979 KPNA6O60684 536 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 RGS20O76081 388 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 ARIH2O95376 493 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 EYA4O95677 639 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 JAK3P52333 1124 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 SLC12A3P55017 1021 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 STIM1Q13586 685 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 TTLL4Q14679 1199 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 BRDTQ58F21 947 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-204ENST00000581979 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 ENOX1Q8TC92 643 aaKnown RBP13.95□□□□□ -0.18
SRSF1-204ENST00000581979 PDLIM2Q96JY6 352 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 LXNQ9BS40 222 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 TRIM5Q9C035 493 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 CTNND2Q9UQB3 1225 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 SCN10AQ9Y5Y9 1956 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 WDR64B1ANS9 1081 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 B4GALT4O60513 344 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 P4HBP07237 508 aaKnown RBP13.95□□□□□ -0.18
SRSF1-204ENST00000581979 CSF2RAP15509 400 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 CYP11B2P19099 503 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 SFNP31947 248 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 ZNF697Q5TEC3 545 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 SYT2Q8N9I0 419 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-204ENST00000581979 GIMAP8Q8ND71 665 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-204ENST00000581979 COPS5Q92905 334 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 GUCD1Q96NT3 240 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 NACC1Q96RE7 527 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.95□□□□□ -0.182e-21■■□□□ 11.4
SRSF1-204ENST00000581979 MTG1Q9BT17 334 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-204ENST00000581979 PPP1R12CQ9BZL4 782 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 TRPV6Q9H1D0 765 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 BHMT2Q9H2M3 363 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 HIPK3Q9H422 1215 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 MAPK8IP1Q9UQF2 711 aa13.95□□□□□ -0.18
SRSF1-204ENST00000581979 NFASCO94856 1347 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 MYL3P08590 195 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 KCNA2P16389 499 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 ICAM3P32942 547 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 CYP2C18P33260 490 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 PRCPP42785 496 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 STX17P56962 302 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 TMEM240Q5SV17 173 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 RASIP1Q5U651 963 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 ZNF746Q6NUN9 644 aaPredicted RBP13.94□□□□□ -0.18
SRSF1-204ENST00000581979 SARM1Q6SZW1 724 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 SEPT14Q6ZU15 432 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 CCDC65Q8IXS2 484 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 PIGOQ8TEQ8 1089 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 NOC4LQ9BVI4 516 aaKnown RBP13.94□□□□□ -0.18
SRSF1-204ENST00000581979 NFE2L3Q9Y4A8 694 aa13.94□□□□□ -0.18
SRSF1-204ENST00000581979 NPHP3-ACAD11A0A0J9YXS1 232 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 SUPT20HL2P0C7V6 817 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 PPP1R2P41236 205 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 PAK1Q13153 545 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 TPD52L1Q16890 204 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-204ENST00000581979 NFRKBQ6P4R8 1299 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 ADSSL1Q8N142 457 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 RDM1Q8NG50 284 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 NELFBQ8WX92 580 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 DNAJC19Q96DA6 116 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 SEMA6BQ9H3T3 888 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 ZSWIM4Q9H7M6 989 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 JPH1Q9HDC5 661 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-204ENST00000581979 PANK4Q9NVE7 773 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 FANCLQ9NW38 375 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 RWDD2AQ9UIY3 292 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 UMODL1Q5DID0 1318 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 TMEM265A0A087WTH1 108 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-204ENST00000581979 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-204ENST00000581979 PSMA7O14818 248 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 CCNE2O96020 404 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 QARSP47897 775 aaKnown RBP13.93□□□□□ -0.18
SRSF1-204ENST00000581979 ZNF75DP51815 510 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-204ENST00000581979 ARHGAP1Q07960 439 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 RAD51AP2Q09MP3 1159 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 STK4Q13043 487 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms