RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 TNPO1Q92973 898 aaKnown RBP12.29□□□□□ -0.44
TOP3A-210ENST00000580713 RTP3Q9BQQ7 232 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 ATP6V0A4Q9HBG4 840 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 DBR1Q9UK59 544 aaKnown RBP12.29□□□□□ -0.44
TOP3A-210ENST00000580713 FBXL21Q9UKT6 434 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 FRMPD4Q14CM0 1322 aa12.29□□□□□ -0.44
TOP3A-210ENST00000580713 WDR87Q6ZQQ6 2873 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 PNMA6FA0A0J9YX94 578 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 PALM3A6NDB9 673 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-210ENST00000580713 ATP9AO75110 1047 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 RPS6KA5O75582 802 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 FGFR1P11362 822 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 AOC1P19801 751 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 RFX1P22670 979 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 PLCB3Q01970 1234 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 LCE2DQ5TA82 110 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-210ENST00000580713 XRRA1Q6P2D8 792 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 CWC27Q6UX04 472 aaKnown RBP12.28□□□□□ -0.44
TOP3A-210ENST00000580713 SLC24A5Q71RS6 500 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 C12orf76Q8N812 135 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-210ENST00000580713 TMEM87AQ8NBN3 555 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 TRAPPC12Q8WVT3 735 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 CDHR1Q96JP9 859 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 ZNF558Q96NG5 402 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 CNTNAP3Q9BZ76 1288 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 KRT23Q9C075 422 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 SEMA4AQ9H3S1 761 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 AZI2Q9H6S1 392 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 CWH43Q9H720 699 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 UPF2Q9HAU5 1272 aaKnown RBP12.28□□□□□ -0.44
TOP3A-210ENST00000580713 C1orf112Q9NSG2 853 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 PCDHA2Q9Y5H9 948 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 HCFC2Q9Y5Z7 792 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 NCOR2Q9Y618 2525 aa12.28□□□□□ -0.44
TOP3A-210ENST00000580713 DMDP11532 3685 aa12.27□□□□□ -0.44
TOP3A-210ENST00000580713 TPRP12270 2363 aaKnown RBP12.27□□□□□ -0.44
TOP3A-210ENST00000580713 KCNA2P16389 499 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 SMC1AQ14683 1233 aaKnown RBP12.27□□□□□ -0.45
TOP3A-210ENST00000580713 SLC35G1Q2M3R5 365 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 ATAT1Q5SQI0 421 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 ODR4Q5SWX8 454 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 USP17L6PQ6QN14 398 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 KCNT2Q6UVM3 1135 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 NME8Q8N427 588 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 GPRASP2Q96D09 838 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 RIOX1Q9H6W3 641 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 CNNM2Q9H8M5 875 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 CYP26B1Q9NR63 512 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 RGS18Q9NS28 235 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 SPG21Q9NZD8 308 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 NOC2LQ9Y3T9 749 aaKnown RBP12.27□□□□□ -0.45
TOP3A-210ENST00000580713 R4GN57 208 aa12.27□□□□□ -0.45
TOP3A-210ENST00000580713 BAZ2BQ9UIF8 2168 aaKnown RBP12.27□□□□□ -0.45
TOP3A-210ENST00000580713 CACNA1GO43497 2377 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 SMIM35A0A1B0GVV1 85 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 C9IYK1 514 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 SGSM2O43147 1006 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 CLASP2O75122 1294 aaKnown RBP12.26□□□□□ -0.45
TOP3A-210ENST00000580713 REC8O95072 547 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 ARP10275 920 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 NPR3P17342 541 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 PPM1AP35813 382 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 PBX3P40426 434 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 BMS1Q14692 1282 aaKnown RBP12.26□□□□□ -0.45
TOP3A-210ENST00000580713 PLCB4Q15147 1175 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 IMMTQ16891 758 aaKnown RBP12.26□□□□□ -0.45
TOP3A-210ENST00000580713 KIAA1841Q6NSI8 718 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 KANK3Q6NY19 840 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 ABI1Q8IZP0 508 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 SIX5Q8N196 739 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 CYP2W1Q8TAV3 490 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 ACSF2Q96CM8 615 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-210ENST00000580713 TMEM161AQ9NX61 479 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 ST3GAL5Q9UNP4 418 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 EPG5Q9HCE0 2579 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 KDM3AQ9Y4C1 1321 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 ZNF292O60281 2723 aa12.26□□□□□ -0.45
TOP3A-210ENST00000580713 C2orf71A6NGG8 1288 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 GPR182O15218 404 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 CYTH3O43739 400 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 CXCL14O95715 111 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 EOMESO95936 686 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 TDGQ13569 410 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 GRM4Q14833 912 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 SEC23AQ15436 765 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 MTHFD1LQ6UB35 978 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 MRPL43Q8N983 215 aaKnown RBP12.25□□□□□ -0.45
TOP3A-210ENST00000580713 RIN2Q8WYP3 895 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-210ENST00000580713 PPP1R16BQ96T49 567 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 PCYT2Q99447 389 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 TMEM117Q9H0C3 514 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 CDHR5Q9HBB8 845 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 DZANK1Q9NVP4 752 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 WDR70Q9NW82 654 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 USTQ9Y2C2 406 aa12.25□□□□□ -0.45
TOP3A-210ENST00000580713 FNDC1Q4ZHG4 1894 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms