RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 LCHNA4D1U4 455 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 P4HBP07237 508 aaKnown RBP12.21□□□□□ -0.45
NDEL1-208ENST00000580237 OR52Z1P0C646 297 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 GJB2P29033 226 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 DNM2P50570 870 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 POLGP54098 1239 aaPredicted RBP12.21□□□□□ -0.45
NDEL1-208ENST00000580237 EPHA7Q15375 998 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 MICALL1Q8N3F8 863 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 NEK9Q8TD19 979 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 NLRP7Q8WX94 980 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 SLC7A3Q8WY07 619 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 JPH2Q9BR39 696 aaPredicted RBP12.21□□□□□ -0.45
NDEL1-208ENST00000580237 SH2D3AQ9BRG2 576 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 BACH2Q9BYV9 841 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 AGO3Q9H9G7 860 aaKnown RBP12.21□□□□□ -0.45
NDEL1-208ENST00000580237 PADI3Q9ULW8 664 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 INSL6Q9Y581 213 aa12.21□□□□□ -0.45
NDEL1-208ENST00000580237 COL4A6Q14031 1691 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 DENND3A2RUS2 1198 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 POTEMA6NI47 508 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 WNT7AO00755 349 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 GPR182O15218 404 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 TRAPPC10P48553 1259 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 CRYBB1P53674 252 aaPredicted RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 NLRP11P59045 1033 aaKnown RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 TAP1Q03518 808 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 ORC2Q13416 577 aaPredicted RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 CTTNQ14247 550 aaKnown RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 ZNF174Q15697 407 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 OTUD6AQ7L8S5 288 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 TPH2Q8IWU9 490 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 ZNF710Q8N1W2 664 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 DYDC2Q96IM9 177 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 ZNF668Q96K58 619 aaPredicted RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 CEP170P1Q96L14 293 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 NIFKQ9BYG3 293 aaKnown RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 ZSWIM4Q9H7M6 989 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 CYP26B1Q9NR63 512 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 RGL1Q9NZL6 768 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 LRFN2Q9ULH4 789 aa12.2□□□□□ -0.46
NDEL1-208ENST00000580237 PRRC2BQ5JSZ5 2229 aaKnown RBP12.2□□□□□ -0.46
NDEL1-208ENST00000580237 FNDC1Q4ZHG4 1894 aaPredicted RBP12.19□□□□□ -0.46
NDEL1-208ENST00000580237 STAG3L1P0CL83 205 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 YWHABP31946 246 aaKnown RBP12.19□□□□□ -0.46
NDEL1-208ENST00000580237 SPIRE1Q08AE8 756 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 TARBP2Q15633 366 aaKnown RBP12.19□□□□□ -0.46
NDEL1-208ENST00000580237 XKR9Q5GH70 373 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 ANO5Q75V66 913 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 C4orf19Q8IY42 314 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 ERMNQ8TAM6 284 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 TMEM40Q8WWA1 233 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 PPM1EQ8WY54 764 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 TOP1MTQ969P6 601 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 TGS1Q96RS0 853 aaKnown RBP12.19□□□□□ -0.46
NDEL1-208ENST00000580237 EIF2AK1Q9BQI3 630 aaKnown RBP12.19□□□□□ -0.46
NDEL1-208ENST00000580237 TMEM60Q9H2L4 133 aa12.19□□□□□ -0.46
NDEL1-208ENST00000580237 NOC2LQ9Y3T9 749 aaKnown RBP12.19□□□□□ -0.46
NDEL1-208ENST00000580237 ADGRA3Q8IWK6 1321 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 LINC01553A4QN01 128 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 ARHGEF15O94989 841 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 RFC5P40937 340 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 GPC3P51654 580 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 NPEPPSP55786 919 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 HTRA4P83105 476 aaPredicted RBP12.18□□□□□ -0.46
NDEL1-208ENST00000580237 EMC2Q15006 297 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 HAUS3Q68CZ6 603 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 RHPN2Q8IUC4 686 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 NPAS4Q8IUM7 802 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 EXOC8Q8IYI6 725 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 LINC01465Q8N7H1 131 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 NLRP4Q96MN2 994 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
NDEL1-208ENST00000580237 CDHR5Q9HBB8 845 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 ERVK-5Q9HDB9 667 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
NDEL1-208ENST00000580237 WRAP73Q9P2S5 460 aaPredicted RBP12.18□□□□□ -0.46
NDEL1-208ENST00000580237 ST3GAL5Q9UNP4 418 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 PPME1Q9Y570 386 aa12.18□□□□□ -0.46
NDEL1-208ENST00000580237 ENPP3O14638 875 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 GPR32O75388 356 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 MAFO75444 373 aaPredicted RBP12.17□□□□□ -0.46
NDEL1-208ENST00000580237 STBD1O95210 358 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 SFPQP23246 707 aaKnown RBP eCLIP12.17□□□□□ -0.46
NDEL1-208ENST00000580237 U2AF2P26368 475 aaKnown RBP eCLIP12.17□□□□□ -0.461e-11■■■□□ 17.2
NDEL1-208ENST00000580237 TECP42680 631 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 CDC42EP1Q00587 391 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 DRP2Q13474 957 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 BTG3Q14201 252 aaPredicted RBP12.17□□□□□ -0.46
NDEL1-208ENST00000580237 NBR1Q14596 966 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 FAM228AQ86W67 206 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 FIBCD1Q8N539 461 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 SLC17A8Q8NDX2 589 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 FBXO22Q8NEZ5 403 aa12.17□□□□□ -0.46
NDEL1-208ENST00000580237 PSPC1Q8WXF1 523 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms