RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 SPP2Q13103 211 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 RBM41Q96IZ5 413 aaKnown RBP16.34■□□□□ 0.21
ITGB4-206ENST00000579662 DAGLAQ9Y4D2 1042 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 SYNGAP1Q96PV0 1343 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 ENTPD3O75355 529 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 DYNLT1P63172 113 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 BASP1P80723 227 aaKnown RBP16.34■□□□□ 0.21
ITGB4-206ENST00000579662 KCNB1Q14721 858 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 EPHA7Q15375 998 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 THNSL1Q8IYQ7 743 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 FAM49AQ9H0Q0 323 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-206ENST00000579662 EFCC1Q9HA90 598 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 DONSONQ9NYP3 566 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 CNTNAP4Q9C0A0 1308 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 TRIM49BA6NDI0 452 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 IPO5O00410 1097 aaKnown RBP16.34■□□□□ 0.21
ITGB4-206ENST00000579662 EVI5O60447 810 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 XPAP23025 273 aaPredicted RBP16.34■□□□□ 0.21
ITGB4-206ENST00000579662 CIITAP33076 1130 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 PRR5LQ6MZQ0 368 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 DNAAF3Q8N9W5 541 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.34■□□□□ 0.21
ITGB4-206ENST00000579662 MMP19Q99542 508 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 ARHGAP42A6NI28 874 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 TJP3O95049 919 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 KRT3P12035 628 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 SAT1P21673 171 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 PSMA2P25787 234 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 GPC3P51654 580 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 AP3M2P53677 418 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 KYAT1Q16773 422 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 CCDC38Q502W7 563 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 RAPH1Q70E73 1250 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 OR6B3Q8NGW1 331 aa16.33■□□□□ 0.21
ITGB4-206ENST00000579662 CXCR5P32302 372 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 KCNH2Q12809 1159 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 HHIPL2Q6UWX4 724 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 THEM5Q8N1Q8 247 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 PPP1R16BQ96T49 567 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 FLT1P17948 1338 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 PODXLO00592 558 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 SLC16A4O15374 487 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 ZNF699Q32M78 642 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 ELMSAN1Q6PJG2 1045 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 STOX1Q6ZVD7 989 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 FASTKD5Q7L8L6 764 aaKnown RBP16.33■□□□□ 0.2
ITGB4-206ENST00000579662 LXNQ9BS40 222 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.2
ITGB4-206ENST00000579662 DENND3A2RUS2 1198 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 ADAM22Q9P0K1 906 aa16.33■□□□□ 0.2
ITGB4-206ENST00000579662 GPC5P78333 572 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 ENOSF1Q7L5Y1 443 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 CCDC197Q8NCU1 140 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 BEST2Q8NFU1 509 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 GABBR1Q9UBS5 961 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 MID2Q9UJV3 735 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 ASB14A6NK59 587 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 VAMP7P51809 220 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 THOC5Q13769 683 aaKnown RBP16.32■□□□□ 0.2
ITGB4-206ENST00000579662 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 EIF2AK1Q9BQI3 630 aaKnown RBP16.32■□□□□ 0.2
ITGB4-206ENST00000579662 MTMR4Q9NYA4 1195 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 LRRC53A6NM62 1247 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 NTSR2O95665 410 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 ZBED1O96006 694 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 PRR29P0C7W0 189 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 FCER1AP12319 257 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 EMBQ6PCB8 327 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 TTC13Q8NBP0 860 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 UBE2Q2Q8WVN8 375 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 NYAP2Q9P242 653 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 BAIAP2L1Q9UHR4 511 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 STK38LQ9Y2H1 464 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 IQSEC2Q5JU85 1478 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 POTEFA5A3E0 1075 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 KIF28PB7ZC32 967 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 SART1O43290 800 aaKnown RBP16.32■□□□□ 0.2
ITGB4-206ENST00000579662 POTEIP0CG38 1075 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 POTEGQ6S5H5 508 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 POTEEQ6S8J3 1075 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 SRBD1Q8N5C6 995 aaKnown RBP16.32■□□□□ 0.2
ITGB4-206ENST00000579662 LPAR1Q92633 364 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 FMO2Q99518 471 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 MRPL4Q9BYD3 311 aaKnown RBP16.32■□□□□ 0.2
ITGB4-206ENST00000579662 RNF181Q9P0P0 153 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 ZBTB7AO95365 584 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 TDP2O95551 362 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 EYA4O95677 639 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 STAT3P40763 770 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 CENPUQ71F23 418 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 HDAC11Q96DB2 347 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 PHF20Q9BVI0 1012 aa16.32■□□□□ 0.2
ITGB4-206ENST00000579662 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
ITGB4-206ENST00000579662 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
ITGB4-206ENST00000579662 TMED2Q15363 201 aa16.31■□□□□ 0.2
ITGB4-206ENST00000579662 PARD6BQ9BYG5 372 aa16.31■□□□□ 0.2
ITGB4-206ENST00000579662 POLR3FQ9H1D9 316 aaPredicted RBP16.31■□□□□ 0.2
ITGB4-206ENST00000579662 CNOT8Q9UFF9 292 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms