RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 DHX15O43143 795 aaKnown RBP9.72□□□□□ -0.85
CASC3-206ENST00000579238 HOXA2O43364 376 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 GPR32O75388 356 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 C22orf31O95567 290 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 FGFR1P11362 822 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 HOXB8P17481 243 aaPredicted RBP9.72□□□□□ -0.85
CASC3-206ENST00000579238 ATP4AP20648 1035 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 FUT2Q10981 343 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 TCF15Q12870 199 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 DSC3Q14574 896 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 RTN1Q16799 776 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 PTPN21Q16825 1174 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 KIZQ2M2Z5 673 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 PLPP4Q5VZY2 271 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 SWSAP1Q6NVH7 229 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 ANKRD54Q6NXT1 300 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 PLA2G4DQ86XP0 818 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 CKAP2LQ8IYA6 745 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 BBXQ8WY36 941 aaPredicted RBP9.72□□□□□ -0.85
CASC3-206ENST00000579238 OSMRQ99650 979 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 ESYT1Q9BSJ8 1104 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 TMEM117Q9H0C3 514 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 IRF2BPLQ9H1B7 796 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 NGRNQ9NPE2 291 aaKnown RBP9.72□□□□□ -0.85
CASC3-206ENST00000579238 BARHL2Q9NY43 387 aa9.72□□□□□ -0.85
CASC3-206ENST00000579238 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
CASC3-206ENST00000579238 ZDBF2Q9HCK1 2354 aa9.71□□□□□ -0.85
CASC3-206ENST00000579238 IGLV3-22A0A075B6J6 115 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 FAM86B1E9PN63 330 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 IPO5O00410 1097 aaKnown RBP9.71□□□□□ -0.86
CASC3-206ENST00000579238 MAGEB2O15479 319 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 ZBTB43O43298 467 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 ST18O60284 1047 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 VTNP04004 478 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 CYP3A4P08684 503 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 FAM86B2P0C5J1 330 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 PPM1AP35813 382 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 TECP42680 631 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 KRT17Q04695 432 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 APOBRQ0VD83 1088 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 RNF20Q5VTR2 975 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 ZNF746Q6NUN9 644 aaPredicted RBP9.71□□□□□ -0.86
CASC3-206ENST00000579238 SYCE2Q6PIF2 218 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 KCNT2Q6UVM3 1135 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 ABI1Q8IZP0 508 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 ZNF710Q8N1W2 664 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 LRRC43Q8N309 656 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 METTL13Q8N6R0 699 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 CRYGNQ8WXF5 182 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 ZNF558Q96NG5 402 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 CASD1Q96PB1 797 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 PPP1R16BQ96T49 567 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 TCF25Q9BQ70 676 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 ENTPD7Q9NQZ7 604 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 TBC1D22BQ9NU19 505 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 RNF19AQ9NV58 838 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 CEP131Q9UPN4 1083 aa9.71□□□□□ -0.86
CASC3-206ENST00000579238 MAFBQ9Y5Q3 323 aaPredicted RBP9.71□□□□□ -0.86
CASC3-206ENST00000579238 EVPLQ92817 2033 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 HIDE1A8MVS5 230 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 PSAPP07602 524 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 ZSCAN20P17040 1043 aaPredicted RBP9.7□□□□□ -0.86
CASC3-206ENST00000579238 AVPR2P30518 371 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 NUBP1P53384 320 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 VCPP55072 806 aaKnown RBP9.7□□□□□ -0.86
CASC3-206ENST00000579238 SETQ01105 290 aaPredicted RBP9.7□□□□□ -0.86
CASC3-206ENST00000579238 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 JAKMIP3Q5VZ66 844 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 MCTP2Q6DN12 878 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 LRRC55Q6ZSA7 311 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 ECHDC2Q86YB7 292 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 SMAP1Q8IYB5 467 aaPredicted RBP9.7□□□□□ -0.86
CASC3-206ENST00000579238 CASP10Q92851 521 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 YTHDC1Q96MU7 727 aaKnown RBP9.7□□□□□ -0.86
CASC3-206ENST00000579238 ZNF577Q9BSK1 485 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 FAM217BQ9NTX9 383 aaPredicted RBP9.7□□□□□ -0.86
CASC3-206ENST00000579238 SPG21Q9NZD8 308 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 TCEAL9Q9UHQ7 104 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 BRPF3Q9ULD4 1205 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 NR2E1Q9Y466 385 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 PCDHA10Q9Y5I2 948 aa9.7□□□□□ -0.86
CASC3-206ENST00000579238 ESYT2A0FGR8 921 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 GOLGA8AA7E2F4 631 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 GOLGA8BA8MQT2 603 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 GFRA3O60609 400 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 EIF4BP23588 611 aaKnown RBP9.69□□□□□ -0.86
CASC3-206ENST00000579238 TMOD1P28289 359 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 CDC27P30260 824 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 CLCN3P51790 818 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 RCAN1P53805 252 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 NLRP11P59045 1033 aaKnown RBP9.69□□□□□ -0.86
CASC3-206ENST00000579238 EXOSC10Q01780 885 aaKnown RBP9.69□□□□□ -0.86
CASC3-206ENST00000579238 SMC1AQ14683 1233 aaKnown RBP9.69□□□□□ -0.86
CASC3-206ENST00000579238 PFKFB3Q16875 520 aaPredicted RBP9.69□□□□□ -0.86
CASC3-206ENST00000579238 EFCAB12Q6NXP0 572 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 LLGL2Q6P1M3 1020 aa9.69□□□□□ -0.86
CASC3-206ENST00000579238 DHX32Q7L7V1 743 aaKnown RBP9.69□□□□□ -0.86
CASC3-206ENST00000579238 TRMT1LQ7Z2T5 733 aaKnown RBP9.69□□□□□ -0.86
CASC3-206ENST00000579238 TMC7Q7Z402 723 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms