RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 SV2BQ7L1I2 683 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 LINC01465Q8N7H1 131 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 U2AF1L4Q8WU68 220 aaKnown RBP14.4□□□□□ -0.1
CTC1-205ENST00000578537 LMBR1Q8WVP7 490 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 BSNDQ8WZ55 320 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 DDX12PQ92771 950 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 FAM167AQ96KS9 214 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 CEP170P1Q96L14 293 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 CTAGE1Q96RT6 745 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 MTG1Q9BT17 334 aaPredicted RBP14.4□□□□□ -0.1
CTC1-205ENST00000578537 DHX33Q9H6R0 707 aaKnown RBP14.4□□□□□ -0.1
CTC1-205ENST00000578537 SETD4Q9NVD3 440 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 PCDHA5Q9Y5H7 936 aa14.4□□□□□ -0.1
CTC1-205ENST00000578537 A0A1W2PQ45 241 aaPredicted RBP14.39□□□□□ -0.11
CTC1-205ENST00000578537 A0A1W2PQY0 241 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 HBP1O60381 514 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 ADAM17P78536 824 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 PPFIA1Q13136 1202 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 GIT2Q14161 759 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 EMC2Q15006 297 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 GRIK4Q16099 956 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 NBPF20Q3BBV1 942 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 MAEAQ7L5Y9 396 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 LRRC71Q8N4P6 559 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 SLC17A8Q8NDX2 589 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 GLIS3Q8NEA6 775 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 WNT8BQ93098 351 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 C7orf25Q9BPX7 421 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 PYM1Q9BRP8 204 aaKnown RBP14.39□□□□□ -0.11
CTC1-205ENST00000578537 MAGEF1Q9HAY2 307 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 SPC25Q9HBM1 224 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 HDAC6Q9UBN7 1215 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 ZNF215Q9UL58 517 aaPredicted RBP14.39□□□□□ -0.11
CTC1-205ENST00000578537 PHF24Q9UPV7 400 aa14.39□□□□□ -0.11
CTC1-205ENST00000578537 IGKV6-21A0A0C4DH24 114 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 BIN1O00499 593 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 HIP1RO75146 1068 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 GJB1P08034 283 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 XRCC6P12956 609 aaKnown RBP eCLIP14.38□□□□□ -0.11
CTC1-205ENST00000578537 BMP6P22004 513 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 SARSP49591 514 aaKnown RBP14.38□□□□□ -0.11
CTC1-205ENST00000578537 SLC26A2P50443 739 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 CLCN3P51790 818 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 ASIC1P78348 528 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 EHHADHQ08426 723 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 ISM2Q6H9L7 571 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 CNNM4Q6P4Q7 775 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 RUFY4Q6ZNE9 571 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 RNF180Q86T96 592 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 SPATA20Q8TB22 786 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 ASAP3Q8TDY4 903 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 GZF1Q9H116 711 aaPredicted RBP14.38□□□□□ -0.11
CTC1-205ENST00000578537 TUBE1Q9UJT0 475 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 MAN1B1Q9UKM7 699 aa14.38□□□□□ -0.11
CTC1-205ENST00000578537 SCN5AQ14524 2016 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 COL1A2P08123 1366 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 SYCE3A1L190 88 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 FRMD3A2A2Y4 597 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 SFI1A8K8P3 1242 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 DKC1O60832 514 aaKnown RBP eCLIP14.37□□□□□ -0.11
CTC1-205ENST00000578537 SGPL1O95470 568 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 GUCY2CP25092 1073 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 COASYQ13057 564 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 SKOR2Q2VWA4 1001 aaPredicted RBP14.37□□□□□ -0.11
CTC1-205ENST00000578537 ZSCAN23Q3MJ62 389 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 KMT5BQ4FZB7 885 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 GDF6Q6KF10 455 aaPredicted RBP14.37□□□□□ -0.11
CTC1-205ENST00000578537 SFR1Q86XK3 245 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 ELOA2Q8IYF1 753 aaPredicted RBP14.37□□□□□ -0.11
CTC1-205ENST00000578537 SMYD4Q8IYR2 804 aaPredicted RBP14.37□□□□□ -0.11
CTC1-205ENST00000578537 KCTD17Q8N5Z5 321 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 DPF3Q92784 378 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 TMEM143Q96AN5 459 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 FIZ1Q96SL8 496 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 FUCA2Q9BTY2 467 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 ADGRA3Q8IWK6 1321 aa14.37□□□□□ -0.11
CTC1-205ENST00000578537 MBLAC1A4D2B0 266 aaPredicted RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 DNM1LO00429 736 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 TREHO43280 583 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 KPNA6O60684 536 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 MAFO75444 373 aaPredicted RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 RPN1P04843 607 aaKnown RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 CASP5P51878 434 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 ZNF131P52739 623 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 POLGP54098 1239 aaPredicted RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 BRDTQ58F21 947 aaPredicted RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 ZNF484Q5JVG2 852 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 OTUD6AQ7L8S5 288 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 PCSK9Q8NBP7 692 aaKnown RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 ZNF668Q96K58 619 aaPredicted RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 CCDC43Q96MW1 224 aaKnown RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 TSEN34Q9BSV6 310 aaKnown RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 POLR3FQ9H1D9 316 aaPredicted RBP14.36□□□□□ -0.11
CTC1-205ENST00000578537 PRO3102Q9H379 93 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 ATP6V0A4Q9HBG4 840 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 NRBP2Q9NSY0 501 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 KIAA1468Q9P260 1216 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 GDAQ9Y2T3 454 aa14.36□□□□□ -0.11
CTC1-205ENST00000578537 CUL9Q8IWT3 2517 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms