RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 ELNP15502 786 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 RARRES1P49788 294 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 LRMPQ12912 555 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 TBX2Q13207 712 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-218ENST00000578469 NEDD9Q14511 834 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 NELFCDQ8IXH7 590 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 CCDC112Q8NEF3 446 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 CEP63Q96MT8 703 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 DEFB118Q96PH6 123 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 GABBR1Q9UBS5 961 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.7■□□□□ 0.58
SREBF1-218ENST00000578469 ASTN1O14525 1302 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 LGALS16A8MUM7 142 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 EIF3DO15371 548 aaKnown RBP eCLIP18.69■□□□□ 0.58
SREBF1-218ENST00000578469 CALUO43852 315 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-218ENST00000578469 GCNT3O95395 438 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 PRKCSHP14314 528 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-218ENST00000578469 DNM2P50570 870 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 ZNF131P52739 623 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 ACTR2P61160 394 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 UBXN1Q04323 297 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 ARID5BQ14865 1188 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 KNOP1Q1ED39 458 aaKnown RBP18.69■□□□□ 0.58
SREBF1-218ENST00000578469 BMT2Q1RMZ1 405 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 EDRF1Q3B7T1 1238 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 XKR9Q5GH70 373 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 ARMCX5Q6P1M9 558 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 EPM2AIP1Q7L775 607 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-218ENST00000578469 SLC17A8Q8NDX2 589 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 GLIS3Q8NEA6 775 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 KIAA1524Q8TCG1 905 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 ZNF507Q8TCN5 953 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 TUBGCP2Q9BSJ2 902 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 MORF4L1Q9UBU8 362 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 UBE4BO95155 1302 aa18.69■□□□□ 0.58
SREBF1-218ENST00000578469 LCTP09848 1927 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 PES1O00541 588 aaKnown RBP18.68■□□□□ 0.58
SREBF1-218ENST00000578469 HIP1RO75146 1068 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 PGK2P07205 417 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 SUPT20HL2P0C7V6 817 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 SKILP12757 684 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 PBX1P40424 430 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 TRIM14Q14142 442 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 UGCGQ16739 394 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 ZCWPW2Q504Y3 356 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 SWSAP1Q6NVH7 229 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 ABHD15Q6UXT9 468 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 FAM178BQ8IXR5 827 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 NOC4LQ9BVI4 516 aaKnown RBP18.68■□□□□ 0.58
SREBF1-218ENST00000578469 FGFBP2Q9BYJ0 223 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 KCTD10Q9H3F6 313 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 LARSQ9P2J5 1176 aaKnown RBP18.68■□□□□ 0.58
SREBF1-218ENST00000578469 PYCARDQ9ULZ3 195 aa18.68■□□□□ 0.58
SREBF1-218ENST00000578469 A0A1W2PQC6 194 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 ASB14A6NK59 587 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 SFI1A8K8P3 1242 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 PDXKO00764 312 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 BACH1O14867 736 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 CETN3O15182 167 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 STRNO43815 780 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 MYBP10242 640 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 MAPTP10636 758 aaKnown RBP18.67■□□□□ 0.58
SREBF1-218ENST00000578469 SP4Q02446 784 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 ALCAMQ13740 583 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 FAM110CQ1W6H9 321 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 ODR4Q5SWX8 454 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 FKBP15Q5T1M5 1219 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 CYFIP1Q7L576 1253 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 ANKRD13CQ8N6S4 541 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 DRC1Q96MC2 740 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 PAK6Q9NQU5 681 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-218ENST00000578469 TRAF3IP3Q9Y228 551 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 PCDHB13Q9Y5F0 798 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 IVNS1ABPQ9Y6Y0 642 aa18.67■□□□□ 0.58
SREBF1-218ENST00000578469 AKR1B15C9JRZ8 316 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-218ENST00000578469 USO1O60763 962 aaKnown RBP18.66■□□□□ 0.58
SREBF1-218ENST00000578469 PRPF6O94906 941 aaKnown RBP18.66■□□□□ 0.58
SREBF1-218ENST00000578469 RPL13P26373 211 aaKnown RBP18.66■□□□□ 0.58
SREBF1-218ENST00000578469 CASP5P51878 434 aa18.66■□□□□ 0.58
SREBF1-218ENST00000578469 CCZ1BP86790 482 aa18.66■□□□□ 0.58
SREBF1-218ENST00000578469 CCZ1P86791 482 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-218ENST00000578469 MAN2A1Q16706 1144 aa18.66■□□□□ 0.58
SREBF1-218ENST00000578469 CCDC40Q4G0X9 1142 aa18.66■□□□□ 0.58
SREBF1-218ENST00000578469 LRRC55Q6ZSA7 311 aa18.66■□□□□ 0.58
SREBF1-218ENST00000578469 NECAB2Q7Z6G3 386 aa18.66■□□□□ 0.58
SREBF1-218ENST00000578469 ABRAQ8N0Z2 381 aa18.66■□□□□ 0.58
SREBF1-218ENST00000578469 PORCNQ9H237 461 aa18.66■□□□□ 0.58
SREBF1-218ENST00000578469 TYW1Q9NV66 732 aaKnown RBP18.66■□□□□ 0.58
SREBF1-218ENST00000578469 KIAA1217Q5T5P2 1943 aa18.65■□□□□ 0.58
SREBF1-218ENST00000578469 ATG7O95352 703 aa18.65■□□□□ 0.58
SREBF1-218ENST00000578469 UBA1P22314 1058 aaKnown RBP18.65■□□□□ 0.58
SREBF1-218ENST00000578469 SP2Q02086 613 aa18.65■□□□□ 0.58
SREBF1-218ENST00000578469 TBC1D8BQ0IIM8 1120 aa18.65■□□□□ 0.58
SREBF1-218ENST00000578469 NOLC1Q14978 699 aaKnown RBP eCLIP18.65■□□□□ 0.58
SREBF1-218ENST00000578469 PTPN21Q16825 1174 aa18.65■□□□□ 0.58
SREBF1-218ENST00000578469 XKR3Q5GH77 459 aa18.65■□□□□ 0.58
SREBF1-218ENST00000578469 FAM160B1Q5W0V3 765 aa18.65■□□□□ 0.58
SREBF1-218ENST00000578469 ZNF720Q7Z2F6 126 aa18.65■□□□□ 0.58
SREBF1-218ENST00000578469 MORC4Q8TE76 937 aa18.65■□□□□ 0.58
SREBF1-218ENST00000578469 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms