RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	OSMR	Q99650	979 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	S1PR5	Q9H228	398 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	UNC45A	Q9H3U1	944 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	NSUN3	Q9H649	340 aa	Known RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	RGS18	Q9NS28	235 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	RBM28	Q9NW13	759 aa	Known RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	VPS54	Q9P1Q0	977 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	VAV3	Q9UKW4	847 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	BARX2	Q9UMQ3	279 aa	Predicted RBP	5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ST3GAL5	Q9UNP4	418 aa		5.07	□□□□□ -1.6
PPP4R1-209	ENST00000578329	COL1A2	P08123	1366 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CYP3A7-CYP3A51P	A0A087WV96	503 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	HIDE1	A8MVS5	230 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	LOC730098	B7Z3J9	87 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PER2	O15055	1255 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZBTB39	O15060	712 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	HBP1	O60381	514 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	EFEMP2	O95967	443 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	FOS	P01100	380 aa	Predicted RBP	5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	GNAT1	P11488	350 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CYP3A7	P24462	503 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SARS	P49591	514 aa	Known RBP	5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	KRT76	Q01546	638 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SPIRE1	Q08AE8	756 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	BTG3	Q14201	252 aa	Predicted RBP	5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CBX2	Q14781	532 aa	Predicted RBP	5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	AAK1	Q2M2I8	961 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TIGD5	Q53EQ6	642 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PRR16	Q569H4	304 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	IER5L	Q5T953	404 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZNF746	Q6NUN9	644 aa	Predicted RBP	5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	HFE2	Q6ZVN8	426 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ANO5	Q75V66	913 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	NPAS4	Q8IUM7	802 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	KSR1	Q8IVT5	923 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TEX2	Q8IWB9	1127 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ADHFE1	Q8IWW8	467 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	EFHB	Q8N7U6	833 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SMRP1	Q8NCR6	262 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	POF1B	Q8WVV4	589 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	HAS1	Q92839	578 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ADAM2	Q99965	735 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	UPF3B	Q9BZI7	483 aa	Known RBP	5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CXCL16	Q9H2A7	254 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SMOC2	Q9H3U7	446 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	MINDY3	Q9H8M7	445 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZNF302	Q9NR11	478 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TYW1	Q9NV66	732 aa	Known RBP	5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CLDND1	Q9NY35	253 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	GABBR1	Q9UBS5	961 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	MUTYH	Q9UIF7	546 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TRPC6	Q9Y210	931 aa		5.06	□□□□□ -1.6
PPP4R1-209	ENST00000578329	USP34	Q70CQ2	3546 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ARID2	Q68CP9	1835 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	MYO10	Q9HD67	2058 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	hCG_1984214	I3L0E3	225 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SEC24B	O95487	1268 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	DARS	P14868	501 aa	Known RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	IGFBP6	P24592	240 aa	Predicted RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	HOXA11	P31270	313 aa	Predicted RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	NRIP1	P48552	1158 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SLC26A2	P50443	739 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	METAP2	P50579	478 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	GPC3	P51654	580 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CRYBB1	P53674	252 aa	Predicted RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	NLRP11	P59045	1033 aa	Known RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PRKCE	Q02156	737 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SCRN1	Q12765	414 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	COASY	Q13057	564 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PAK2	Q13177	524 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	DUSP6	Q16828	381 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	HERC4	Q5GLZ8	1057 aa	Predicted RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZNF484	Q5JVG2	852 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TMEM31	Q5JXX7	168 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	UBXN11	Q5T124	520 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PDXDC2P	Q6P474	469 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TMEM184A	Q6ZMB5	413 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SLC24A5	Q71RS6	500 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TRMT1L	Q7Z2T5	733 aa	Known RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	RBM23	Q86U06	439 aa	Known RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ECHDC2	Q86YB7	292 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	RNF135	Q8IUD6	432 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	REXO1	Q8N1G1	1221 aa	Known RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SLC39A11	Q8N1S5	342 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	NME8	Q8N427	588 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZNF713	Q8N859	430 aa	Predicted RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	COLGALT1	Q8NBJ5	622 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	DAGLB	Q8NCG7	672 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	TBCK	Q8TEA7	893 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	BBX	Q8WY36	941 aa	Predicted RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ASIC4	Q96FT7	647 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	CCDC136	Q96JN2	1154 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	SDF4	Q9BRK5	362 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	ZNF577	Q9BSK1	485 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	C11orf84	Q9BUA3	381 aa	Predicted RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	PLVAP	Q9BX97	442 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	C1QTNF1	Q9BXJ1	281 aa		5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	RNF26	Q9BY78	433 aa	Predicted RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	NIFK	Q9BYG3	293 aa	Known RBP	5.05	□□□□□ -1.6
PPP4R1-209	ENST00000578329	LMAN2L	Q9H0V9	348 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms