RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TMEM63BQ5T3F8 832 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 FAM114A1Q8IWE2 563 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 SLC17A8Q8NDX2 589 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 KIFAP3Q92845 792 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 FIZ1Q96SL8 496 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 SRRTQ9BXP5 876 aaKnown RBP20.5■□□□□ 0.87
PRKCA-203ENST00000578063 SMARCAD1Q9H4L7 1026 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 POLD4Q9HCU8 107 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 FLRT1Q9NZU1 646 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 ARID2Q68CP9 1835 aa20.49■□□□□ 0.87
PRKCA-203ENST00000578063 MYBP10242 640 aa20.49■□□□□ 0.87
PRKCA-203ENST00000578063 SMPD1P17405 629 aa20.49■□□□□ 0.87
PRKCA-203ENST00000578063 EEF1GP26641 437 aaKnown RBP20.49■□□□□ 0.87
PRKCA-203ENST00000578063 CCDC144BQ3MJ40 725 aa20.49■□□□□ 0.87
PRKCA-203ENST00000578063 FAM102BQ5T8I3 360 aa20.49■□□□□ 0.87
PRKCA-203ENST00000578063 MAEAQ7L5Y9 396 aa20.49■□□□□ 0.87
PRKCA-203ENST00000578063 ZNF507Q8TCN5 953 aa20.49■□□□□ 0.87
PRKCA-203ENST00000578063 BBXQ8WY36 941 aaPredicted RBP20.49■□□□□ 0.87
PRKCA-203ENST00000578063 KCTD10Q9H3F6 313 aa20.49■□□□□ 0.87
PRKCA-203ENST00000578063 C17orf75Q9HAS0 396 aa20.49■□□□□ 0.87
PRKCA-203ENST00000578063 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.48■□□□□ 0.87
PRKCA-203ENST00000578063 GOLGA6L6A8MZA4 724 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 KCNJ18B7U540 433 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 IGHA2P01877 340 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 XRCC5P13010 732 aaKnown RBP20.48■□□□□ 0.87
PRKCA-203ENST00000578063 RFC5P40937 340 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 KCNJ12Q14500 433 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 KNOP1Q1ED39 458 aaKnown RBP20.48■□□□□ 0.87
PRKCA-203ENST00000578063 TCP11X2Q5H9J9 407 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 ZNF720Q7Z2F6 126 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 NELFCDQ8IXH7 590 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 ATP8B4Q8TF62 1192 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 TRIM44Q96DX7 344 aaPredicted RBP20.48■□□□□ 0.87
PRKCA-203ENST00000578063 PDLIM7Q9NR12 457 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 MAGEC2Q9UBF1 373 aaPredicted RBP20.48■□□□□ 0.87
PRKCA-203ENST00000578063 LIMA1Q9UHB6 759 aaKnown RBP20.48■□□□□ 0.87
PRKCA-203ENST00000578063 PCDHB13Q9Y5F0 798 aa20.48■□□□□ 0.87
PRKCA-203ENST00000578063 MYH9P35579 1960 aaKnown RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 PTMAP06454 111 aaKnown RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 NMT1P30419 496 aaKnown RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 VEGFBP49765 207 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 POLGP54098 1239 aaPredicted RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 RTP1P59025 263 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 TNFAIP2Q03169 654 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 KIF22Q14807 665 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 CCL14Q16627 93 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 EDRF1Q3B7T1 1238 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 GJC2Q5T442 439 aaPredicted RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 DRC7Q8IY82 874 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 K7ENM7 598 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 PRPF6O94906 941 aaKnown RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 TBC1D8O95759 1140 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 ZNF865P0CJ78 1059 aaPredicted RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 FKBP3Q00688 224 aaKnown RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 SP3Q02447 781 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 EMC2Q15006 297 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 TARBP2Q15633 366 aaKnown RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 APTXQ7Z2E3 356 aaKnown RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 TRIM50Q86XT4 487 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 IRF2BP1Q8IU81 584 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 OR6J1Q8NGC5 347 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 AFG1LQ8WV93 481 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 SLC7A3Q8WY07 619 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 ST6GALNAC4Q9H4F1 302 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 DHX33Q9H6R0 707 aaKnown RBP20.47■□□□□ 0.87
PRKCA-203ENST00000578063 GPRC5CQ9NQ84 441 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 XPNPEP1Q9NQW7 623 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 ERAP1Q9NZ08 941 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 NRBP1Q9UHY1 535 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 TRAF3IP3Q9Y228 551 aa20.47■□□□□ 0.87
PRKCA-203ENST00000578063 MGAMO43451 1857 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 A0A1B0GTH6 734 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 LRRC10BA6NIK2 292 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 PDXKO00764 312 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 CYP2C19P33261 490 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 DMP1Q13316 513 aaPredicted RBP20.46■□□□□ 0.87
PRKCA-203ENST00000578063 KRT31Q15323 416 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 FILIP1LQ4L180 1135 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 LRRC55Q6ZSA7 311 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 EXOC8Q8IYI6 725 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 NAP1L5Q96NT1 182 aaPredicted RBP20.46■□□□□ 0.87
PRKCA-203ENST00000578063 CEP89Q96ST8 783 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 ARHGAP39Q9C0H5 1083 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 TYW1Q9NV66 732 aaKnown RBP20.46■□□□□ 0.87
PRKCA-203ENST00000578063 KCNG1Q9UIX4 513 aa20.46■□□□□ 0.87
PRKCA-203ENST00000578063 DOCK3Q8IZD9 2030 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 CALUO43852 315 aaPredicted RBP20.45■□□□□ 0.86
PRKCA-203ENST00000578063 PPFIA4O75335 1185 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 PPP1R37O75864 691 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 LGALS2P05162 132 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 HOXD8P13378 290 aaPredicted RBP20.45■□□□□ 0.86
PRKCA-203ENST00000578063 SMTNP53814 917 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 HTRA3P83110 453 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 PLCB4Q15147 1175 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 HS1BP3Q53T59 392 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 SPC24Q8NBT2 197 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 SPIRE2Q8WWL2 714 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 CEP63Q96MT8 703 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 STRA6Q9BX79 667 aa20.45■□□□□ 0.86
PRKCA-203ENST00000578063 PTGS1P23219 599 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms