RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 TPH2Q8IWU9 490 aa24.84■■□□□ 1.57
SMARCD2-206ENST00000577990 LRRC71Q8N4P6 559 aa24.84■■□□□ 1.57
SMARCD2-206ENST00000577990 APBB2Q92870 758 aa24.84■■□□□ 1.57
SMARCD2-206ENST00000577990 CEP89Q96ST8 783 aa24.84■■□□□ 1.57
SMARCD2-206ENST00000577990 MAP7D2Q96T17 732 aa24.84■■□□□ 1.57
SMARCD2-206ENST00000577990 IFIH1Q9BYX4 1025 aaKnown RBP24.84■■□□□ 1.57
SMARCD2-206ENST00000577990 MICAL3Q7RTP6 2002 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 DLL1O00548 723 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 MYOGP15173 224 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 SYT1P21579 422 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 YWHABP31946 246 aaKnown RBP24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 TSHZ1Q6ZSZ6 1077 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 BRAPQ7Z569 592 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 PHOSPHO2Q8TCD6 241 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 SH2D3AQ9BRG2 576 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 PRDM12Q9H4Q4 367 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 SUGCTQ9HAC7 445 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 CYP26B1Q9NR63 512 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 SQORQ9Y6N5 450 aa24.83■■□□□ 1.57
SMARCD2-206ENST00000577990 LOXHD1Q8IVV2 1947 aa24.82■■□□□ 1.56
SMARCD2-206ENST00000577990 LAD1O00515 517 aa24.82■■□□□ 1.56
SMARCD2-206ENST00000577990 LYPLA2O95372 231 aa24.82■■□□□ 1.56
SMARCD2-206ENST00000577990 FXR2P51116 673 aaKnown RBP eCLIP24.82■■□□□ 1.566e-8■□□□□ 9.9
SMARCD2-206ENST00000577990 OTUD6AQ7L8S5 288 aa24.82■■□□□ 1.56
SMARCD2-206ENST00000577990 USP38Q8NB14 1042 aa24.82■■□□□ 1.56
SMARCD2-206ENST00000577990 CEP170P1Q96L14 293 aa24.82■■□□□ 1.56
SMARCD2-206ENST00000577990 AKT3Q9Y243 479 aa24.82■■□□□ 1.56
SMARCD2-206ENST00000577990 PPME1Q9Y570 386 aa24.82■■□□□ 1.56
SMARCD2-206ENST00000577990 TRANK1O15050 2925 aa24.82■■□□□ 1.56
SMARCD2-206ENST00000577990 IGKV6-21A0A0C4DH24 114 aa24.81■■□□□ 1.56
SMARCD2-206ENST00000577990 VTNP04004 478 aa24.81■■□□□ 1.56
SMARCD2-206ENST00000577990 NPEPPSP55786 919 aa24.81■■□□□ 1.56
SMARCD2-206ENST00000577990 MKRN4PQ13434 485 aaPredicted RBP24.81■■□□□ 1.56
SMARCD2-206ENST00000577990 FERMT3Q86UX7 667 aa24.81■■□□□ 1.56
SMARCD2-206ENST00000577990 ERMNQ8TAM6 284 aa24.81■■□□□ 1.56
SMARCD2-206ENST00000577990 GINS2Q9Y248 185 aa24.81■■□□□ 1.56
SMARCD2-206ENST00000577990 MAFO75444 373 aaPredicted RBP24.8■■□□□ 1.56
SMARCD2-206ENST00000577990 PRPHP41219 470 aa24.8■■□□□ 1.56
SMARCD2-206ENST00000577990 DEFB103AP81534 67 aa24.8■■□□□ 1.56
SMARCD2-206ENST00000577990 PPP1R16BQ96T49 567 aa24.8■■□□□ 1.56
SMARCD2-206ENST00000577990 JPH2Q9BR39 696 aaPredicted RBP24.8■■□□□ 1.56
SMARCD2-206ENST00000577990 AGO3Q9H9G7 860 aaKnown RBP24.8■■□□□ 1.56
SMARCD2-206ENST00000577990 SLC28A3Q9HAS3 691 aa24.8■■□□□ 1.56
SMARCD2-206ENST00000577990 TUFT1Q9NNX1 390 aa24.8■■□□□ 1.56
SMARCD2-206ENST00000577990 ARID2Q68CP9 1835 aa24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 GPR32O75388 356 aa24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 CD52P31358 61 aa24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 CRYBB1P53674 252 aaPredicted RBP24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 KIZQ2M2Z5 673 aa24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 XKR9Q5GH70 373 aa24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 HERC6Q8IVU3 1022 aa24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 ZNF710Q8N1W2 664 aa24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 ZNF579Q8NAF0 562 aaKnown RBP24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 POLR3CQ9BUI4 534 aaPredicted RBP24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 CDHR5Q9HBB8 845 aa24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 REV3LO60673 3130 aa24.79■■□□□ 1.56
SMARCD2-206ENST00000577990 ZBTB39O15060 712 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 MED24O75448 989 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 HSP90AA1P07900 732 aaKnown RBP24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 SPATA31C1P0DKV0 1188 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 RFC5P40937 340 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 DNM2P50570 870 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 ATP2C1P98194 919 aaPredicted RBP24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 PAK2Q13177 524 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 DRP2Q13474 957 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 CATSPER3Q86XQ3 398 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 EXOC8Q8IYI6 725 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 SLC7A3Q8WY07 619 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 OSMRQ99650 979 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 RAB34Q9BZG1 259 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 ANKEF1Q9NU02 776 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 LRWD1Q9UFC0 647 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 PCDHA11Q9Y5I1 949 aa24.78■■□□□ 1.56
SMARCD2-206ENST00000577990 AMHP03971 560 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 RPA1P27694 616 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 POLGP54098 1239 aaPredicted RBP24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 NLRP11P59045 1033 aaKnown RBP24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 PDIA5Q14554 519 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 PPP2R2DQ66LE6 453 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 HAUS3Q68CZ6 603 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 DTHD1Q6ZMT9 781 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 TMEM40Q8WWA1 233 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 GAS2L1Q99501 681 aaPredicted RBP24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 ADAMTS10Q9H324 1103 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 DHX33Q9H6R0 707 aaKnown RBP24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 PADI3Q9ULW8 664 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 MTMR6Q9Y217 621 aa24.77■■□□□ 1.56
SMARCD2-206ENST00000577990 STX6O43752 255 aa24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 RPS6KA5O75582 802 aa24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 GPC3P51654 580 aa24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 RESTQ13127 1097 aa24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 IL17AQ16552 155 aa24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 TMCO2Q7Z6W1 182 aaPredicted RBP24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 MYOCDQ8IZQ8 938 aa24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 IGSF22Q8N9C0 903 aa24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 CCDC43Q96MW1 224 aaKnown RBP24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 SUCLA2Q9P2R7 463 aaPredicted RBP24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 NOC2LQ9Y3T9 749 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms