RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 PRAMEP78395 509 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 PPP2R5CQ13362 524 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 ITGA7Q13683 1181 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 PPP2R5BQ15173 497 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 RPS6KA2Q15349 733 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 MAN2A1Q16706 1144 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 CDR2LQ86X02 465 aaPredicted RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 PLD3Q8IV08 490 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 P2RX5Q93086 422 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 EME1Q96AY2 570 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 QKIQ96PU8 341 aaKnown RBP eCLIP4.73□□□□□ -1.65
CDH8-205ENST00000577730 ZNF184Q99676 751 aaPredicted RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 SEL1LQ9UBV2 794 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 USTQ9Y2C2 406 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 MTO1Q9Y2Z2 717 aaKnown RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 NUP160Q12769 1436 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 FGD5Q6ZNL6 1462 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 DNALI1O14645 258 aaPredicted RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 FKBP6O75344 327 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 PRLP01236 227 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 S100A9P06702 114 aaKnown RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 ENO1P06733 434 aaKnown RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 SP100P23497 879 aaPredicted RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 TBCCQ15814 346 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 PPP1R15BQ5SWA1 713 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 SLF2Q8IX21 1173 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 RSAD2Q8WXG1 361 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 PRCCQ92733 491 aaPredicted RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 SYMPKQ92797 1274 aaKnown RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 PRAM1Q96QH2 718 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 MRPL1Q9BYD6 325 aaKnown RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 CCDC90BQ9GZT6 254 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 CYP4F11Q9HBI6 524 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 METTL5Q9NRN9 209 aaKnown RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 ZNF212Q9UDV6 495 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 HAO1Q9UJM8 370 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 LGALS16A8MUM7 142 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 E7EWF7 191 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 TEX33O43247 280 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 PRPF6O94906 941 aaKnown RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 WDR47O94967 919 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 CHRNA3P32297 505 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 ERFP50548 548 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 GALK1P51570 392 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 KDSRQ06136 332 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 BFSP1Q12934 665 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 COL23A1Q86Y22 540 aaPredicted RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 RBM46Q8TBY0 533 aaKnown RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 ZFAND2BQ8WV99 257 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 TTC25Q96NG3 672 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 OSBPL10Q9BXB5 764 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 EHD4Q9H223 541 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 MAGEF1Q9HAY2 307 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 RXFP1Q9HBX9 757 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 RBM12Q9NTZ6 932 aaKnown RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 SELENONQ9NZV5 590 aa4.73□□□□□ -1.65
CDH8-205ENST00000577730 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.73□□□□□ -1.65
CDH8-205ENST00000577730 A0A1B0GTH6 734 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 COPEO14579 308 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 DAPK3O43293 454 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 GSNP06396 782 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 CDH3P22223 829 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 GRK2P25098 689 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 LRPAP1P30533 357 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 HSD17B3P37058 310 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 SYCP2LQ5T4T6 812 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 RNF220Q5VTB9 566 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 ANKRD23Q86SG2 305 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 PROSER2Q86WR7 435 aaPredicted RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 NELFCDQ8IXH7 590 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 ZNF444Q8N0Y2 327 aaPredicted RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 TATDN2Q93075 761 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 VPS50Q96JG6 964 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 TRIM39Q9HCM9 518 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 EMC3Q9P0I2 261 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 FAM153AQ9UHL3 310 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 COL17A1Q9UMD9 1497 aaPredicted RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 TMEM120BA0PK00 339 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 MIF4GDA9UHW6 222 aaKnown RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 ZNF185O15231 689 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 IDH3BO43837 385 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 COBLO75128 1261 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 SMNDC1O75940 238 aaKnown RBP eCLIP4.72□□□□□ -1.65
CDH8-205ENST00000577730 PDIA3P30101 505 aaKnown RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 TUFMP49411 452 aaKnown RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 DHX34Q14147 1143 aaKnown RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 KLHL38Q2WGJ6 581 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 TTC33Q6PID6 262 aaPredicted RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 TRAPPC11Q7Z392 1133 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 SCUBE1Q8IWY4 988 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 MYOCDQ8IZQ8 938 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 SLC17A8Q8NDX2 589 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 MDM1Q8TC05 714 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 ZC3H15Q8WU90 426 aaKnown RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 LRRC59Q96AG4 307 aaKnown RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 DEPDC7Q96QD5 511 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 RNPEPQ9H4A4 650 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 DSEQ9UL01 958 aa4.72□□□□□ -1.65
CDH8-205ENST00000577730 EPRSP07814 1512 aaKnown RBP4.72□□□□□ -1.65
CDH8-205ENST00000577730 DPPA5A6NC42 116 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms