RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 GRXCR1A8MXD5 290 aa4.16□□□□□ -1.74
TOP2A-202ENST00000577541 FGRP09769 529 aa4.16□□□□□ -1.74
TOP2A-202ENST00000577541 ELAVL1Q15717 326 aaKnown RBP4.16□□□□□ -1.74
TOP2A-202ENST00000577541 TIGD2Q4W5G0 525 aa4.16□□□□□ -1.74
TOP2A-202ENST00000577541 HABP4Q5JVS0 413 aaKnown RBP4.16□□□□□ -1.74
TOP2A-202ENST00000577541 Q6YL49 198 aa4.16□□□□□ -1.74
TOP2A-202ENST00000577541 SUPT20HQ8NEM7 779 aa4.16□□□□□ -1.74
TOP2A-202ENST00000577541 GMLQ99445 158 aa4.16□□□□□ -1.74
TOP2A-202ENST00000577541 Q9UFV3 132 aa4.16□□□□□ -1.74
TOP2A-202ENST00000577541 GOLGA6L6A8MZA4 724 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 ZFPL1O95159 310 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 CAPNS1P04632 268 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 GNAT1P11488 350 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 ERCC5P28715 1186 aaPredicted RBP4.15□□□□□ -1.75
TOP2A-202ENST00000577541 RABGGTBP53611 331 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 GFRA1P56159 465 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 NCAPHQ15003 741 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 STILQ15468 1287 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 PLEKHG4Q58EX7 1191 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 TNNI3KQ59H18 835 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 SLC35F1Q5T1Q4 408 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 SRRM1Q8IYB3 904 aaKnown RBP4.15□□□□□ -1.75
TOP2A-202ENST00000577541 BOLLQ8N9W6 283 aaKnown RBP4.15□□□□□ -1.75
TOP2A-202ENST00000577541 SLC43A3Q8NBI5 491 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 FAM98AQ8NCA5 519 aaKnown RBP4.15□□□□□ -1.75
TOP2A-202ENST00000577541 WNK4Q96J92 1243 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 MNTQ99583 582 aa4.15□□□□□ -1.75
TOP2A-202ENST00000577541 ERCC6LQ2NKX8 1250 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 C1QL3Q5VWW1 255 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 HTR3DQ70Z44 454 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 ZNF227Q86WZ6 799 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 SH3RF2Q8TEC5 729 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 CPLX3Q8WVH0 158 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 PGBD4Q96DM1 585 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 LRFN3Q9BTN0 628 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 CAPN10Q9HC96 672 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 INCENPQ9NQS7 918 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 GALNT8Q9NY28 637 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 PRKAG3Q9UGI9 489 aa4.14□□□□□ -1.75
TOP2A-202ENST00000577541 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 ABCG1P45844 678 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 PTTG1IPP53801 180 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 GNL2Q13823 731 aaKnown RBP4.13□□□□□ -1.75
TOP2A-202ENST00000577541 TMEM200BQ69YZ2 307 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 FAM111BQ6SJ93 734 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 C1QL2Q7Z5L3 287 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 VPS37DQ86XT2 251 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 KCNJ15Q99712 375 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 CD244Q9BZW8 370 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 GPR27Q9NS67 375 aa4.13□□□□□ -1.75
TOP2A-202ENST00000577541 TCRBV5S4A2TA0A5A2 114 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 PTGS1P23219 599 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 ZEB1P37275 1124 aaPredicted RBP4.12□□□□□ -1.75
TOP2A-202ENST00000577541 ZNF81P51508 661 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 STAT5BP51692 787 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 CD83Q01151 205 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 BTBD8Q5XKL5 378 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 MCF2L2Q86YR7 1114 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 ATXN2LQ8WWM7 1075 aaKnown RBP4.12□□□□□ -1.75
TOP2A-202ENST00000577541 BTBD2Q9BX70 525 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 ACTR10Q9NZ32 417 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 LRP2BPQ9P2M1 347 aa4.12□□□□□ -1.75
TOP2A-202ENST00000577541 FAM90A27PA6NNH2 459 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 SMAD7O15105 426 aaKnown RBP4.11□□□□□ -1.75
TOP2A-202ENST00000577541 TYRP1P17643 537 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 GRK2P25098 689 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 MC4RP32245 332 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 GRK3P35626 688 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 GRIA2P42262 883 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 ADCY7P51828 1080 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 ATP2C1P98194 919 aaPredicted RBP4.11□□□□□ -1.75
TOP2A-202ENST00000577541 FKBP15Q5T1M5 1219 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 SIMC1Q8NDZ2 872 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 WDR48Q8TAF3 677 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 ANAPC16Q96DE5 110 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 C1QTNF7Q9BXJ2 289 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 EPN3Q9H201 632 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 SERHL2Q9H4I8 314 aa4.11□□□□□ -1.75
TOP2A-202ENST00000577541 CENPVL1A0A0U1RR11 272 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 KCNAB3O43448 404 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 SSBP05455 408 aaKnown RBP eCLIP4.1□□□□□ -1.75
TOP2A-202ENST00000577541 LAG3P18627 525 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 ETFBP38117 255 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 AVPR1BP47901 424 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 ST5P78524 1137 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 ARID5AQ03989 594 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 MOGSQ13724 837 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 KANK2Q63ZY3 851 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 MRM1Q6IN84 353 aaKnown RBP4.1□□□□□ -1.75
TOP2A-202ENST00000577541 LRSAM1Q6UWE0 723 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 C6orf15Q6UXA7 325 aaPredicted RBP4.1□□□□□ -1.75
TOP2A-202ENST00000577541 CXorf67Q86X51 503 aaPredicted RBP4.1□□□□□ -1.75
TOP2A-202ENST00000577541 FAM178BQ8IXR5 827 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 CPT1CQ8TCG5 803 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 LPPQ93052 612 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.1□□□□□ -1.75
TOP2A-202ENST00000577541 AMNQ9BXJ7 453 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
TOP2A-202ENST00000577541 ZNF408Q9H9D4 720 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms