RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 HERC4Q5GLZ8 1057 aaPredicted RBP13.78□□□□□ -0.2
TSEN54-204ENST00000577197 PRAMEF19Q5SWL8 479 aa13.78□□□□□ -0.2
TSEN54-204ENST00000577197 EPM2AIP1Q7L775 607 aaPredicted RBP13.78□□□□□ -0.2
TSEN54-204ENST00000577197 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.78□□□□□ -0.2
TSEN54-204ENST00000577197 MYOCDQ8IZQ8 938 aa13.78□□□□□ -0.2
TSEN54-204ENST00000577197 ATP8B4Q8TF62 1192 aa13.78□□□□□ -0.2
TSEN54-204ENST00000577197 SPIRE2Q8WWL2 714 aa13.78□□□□□ -0.2
TSEN54-204ENST00000577197 HVCN1Q96D96 273 aa13.78□□□□□ -0.2
TSEN54-204ENST00000577197 PCYT2Q99447 389 aa13.78□□□□□ -0.2
TSEN54-204ENST00000577197 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
TSEN54-204ENST00000577197 PDGFCQ9NRA1 345 aa13.78□□□□□ -0.2
TSEN54-204ENST00000577197 CGNQ9P2M7 1197 aaKnown RBP13.78□□□□□ -0.2
TSEN54-204ENST00000577197 PHLPP2Q6ZVD8 1323 aa13.78□□□□□ -0.2
TSEN54-204ENST00000577197 COL1A2P08123 1366 aa13.78□□□□□ -0.2
TSEN54-204ENST00000577197 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.77□□□□□ -0.21
TSEN54-204ENST00000577197 A6NJR5 290 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 MSCO60682 206 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
TSEN54-204ENST00000577197 CDC25BP30305 580 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 MYH11P35749 1972 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 TNFAIP2Q03169 654 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 MAPK7Q13164 816 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 NFIL3Q16649 462 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 EDRF1Q3B7T1 1238 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 HSDL1Q3SXM5 330 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 BRDTQ58F21 947 aaPredicted RBP13.77□□□□□ -0.21
TSEN54-204ENST00000577197 CDKAL1Q5VV42 579 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 TRPV1Q8NER1 839 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 SH3TC2Q8TF17 1288 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 NELFBQ8WX92 580 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 P2RX5Q93086 422 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 ARMC5Q96C12 935 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 MRFAP1L1Q96HT8 127 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 CTAGE1Q96RT6 745 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 PPP1R9BQ96SB3 815 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 NTPCRQ9BSD7 190 aaKnown RBP13.77□□□□□ -0.21
TSEN54-204ENST00000577197 THAP9Q9H5L6 903 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 DHX33Q9H6R0 707 aaKnown RBP13.77□□□□□ -0.21
TSEN54-204ENST00000577197 ERAP1Q9NZ08 941 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 ZNF215Q9UL58 517 aaPredicted RBP13.77□□□□□ -0.21
TSEN54-204ENST00000577197 GNEQ9Y223 722 aaKnown RBP13.77□□□□□ -0.21
TSEN54-204ENST00000577197 GDAQ9Y2T3 454 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 NFE2L3Q9Y4A8 694 aa13.77□□□□□ -0.21
TSEN54-204ENST00000577197 PCNTO95613 3336 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 LRRC10BA6NIK2 292 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 HBP1O60381 514 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 PLS3P13797 630 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 SMPD1P17405 629 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 EEF1GP26641 437 aaKnown RBP13.76□□□□□ -0.21
TSEN54-204ENST00000577197 CNGA1P29973 690 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 CCND3P30281 292 aaPredicted RBP13.76□□□□□ -0.21
TSEN54-204ENST00000577197 MYBPC2Q14324 1141 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 ZCWPW2Q504Y3 356 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 ISM2Q6H9L7 571 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 TTI2Q6NXR4 508 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 FAM114A1Q8IWE2 563 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 ZC3H3Q8IXZ2 948 aaKnown RBP13.76□□□□□ -0.21
TSEN54-204ENST00000577197 GOLGA5Q8TBA6 731 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 ZNF507Q8TCN5 953 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 CEP170P1Q96L14 293 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 CEP89Q96ST8 783 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 STRA6Q9BX79 667 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 BCAS3Q9H6U6 928 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 ATP6V0A4Q9HBG4 840 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 TRAF3IP3Q9Y228 551 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 PCDHB13Q9Y5F0 798 aa13.76□□□□□ -0.21
TSEN54-204ENST00000577197 PDXKO00764 312 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 CBFA2T2O43439 604 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 KPNA6O60684 536 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 HIP1RO75146 1068 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 DUSP11O75319 330 aaKnown RBP13.75□□□□□ -0.21
TSEN54-204ENST00000577197 MAFO75444 373 aaPredicted RBP13.75□□□□□ -0.21
TSEN54-204ENST00000577197 PPP1R37O75864 691 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 TPM3P06753 285 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 ATP4AP20648 1035 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 SMTNP53814 917 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 PPP2R5AQ15172 486 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 DGKDQ16760 1214 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 ZNF484Q5JVG2 852 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 ZNF720Q7Z2F6 126 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 FAM178BQ8IXR5 827 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 DAW1Q8N136 415 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 SLC7A3Q8WY07 619 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 ZNF333Q96JL9 665 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 MED15Q96RN5 788 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 FIZ1Q96SL8 496 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 TSG101Q99816 390 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.75□□□□□ -0.21
TSEN54-204ENST00000577197 SLC39A2Q9NP94 309 aa13.75□□□□□ -0.21
TSEN54-204ENST00000577197 SEPT9Q9UHD8 586 aaPredicted RBP13.75□□□□□ -0.21
TSEN54-204ENST00000577197 DDX20Q9UHI6 824 aaKnown RBP13.75□□□□□ -0.21
TSEN54-204ENST00000577197 A0A087WWV3 80 aa13.74□□□□□ -0.21
TSEN54-204ENST00000577197 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
TSEN54-204ENST00000577197 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.74□□□□□ -0.21
TSEN54-204ENST00000577197 ZBTB39O15060 712 aa13.74□□□□□ -0.21
TSEN54-204ENST00000577197 USO1O60763 962 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms