RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 GSDMAQ96QA5 445 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 PHF20Q9BVI0 1012 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 YIPF2Q9BWQ6 316 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 BRIP1Q9BX63 1249 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 ELP3Q9H9T3 547 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 RMND1Q9NWS8 449 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 VPS54Q9P1Q0 977 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 ABCF2Q9UG63 623 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 FNDC3AQ9Y2H6 1198 aaKnown RBP6.39□□□□□ -1.39
CTNS-210ENST00000576979 TACC3Q9Y6A5 838 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 ZNF831Q5JPB2 1677 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 SBF2Q86WG5 1849 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 MYH7BA7E2Y1 1941 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 UBE2Q2LH0YL09 131 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 MFAP3LO75121 409 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 ERLIN1O75477 346 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 BMP6P22004 513 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 RAP1GAPP47736 663 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 TRAPPC10P48553 1259 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 HSPA2P54652 639 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 EIF5P55010 431 aaKnown RBP6.38□□□□□ -1.39
CTNS-210ENST00000576979 STX17P56962 302 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 NLRP5P59047 1200 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 CYP27A1Q02318 531 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 GPS2Q13227 327 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 UBE4AQ14139 1066 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 KARSQ15046 597 aaKnown RBP6.38□□□□□ -1.39
CTNS-210ENST00000576979 SEC23AQ15436 765 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 RRAGBQ5VZM2 374 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 TOGARAM2Q6ZUX3 1019 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 NOP9Q86U38 636 aaKnown RBP6.38□□□□□ -1.39
CTNS-210ENST00000576979 ANKRD18AQ8IVF6 992 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 GRAMD1CQ8IYS0 662 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 PLD6Q8N2A8 252 aaKnown RBP6.38□□□□□ -1.39
CTNS-210ENST00000576979 IQUBQ8NA54 791 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 SDR42E1Q8WUS8 393 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 RABGGTAQ92696 567 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 PAGE5Q96GU1 130 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 CRNKL1Q9BZJ0 848 aaKnown RBP6.38□□□□□ -1.39
CTNS-210ENST00000576979 ARFGAP3Q9NP61 516 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 C1GALT1Q9NS00 363 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 SAMSN1Q9NSI8 373 aaKnown RBP6.38□□□□□ -1.39
CTNS-210ENST00000576979 INTS13Q9NVM9 706 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 CALCOCO1Q9P1Z2 691 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 TTF2Q9UNY4 1162 aaKnown RBP6.38□□□□□ -1.39
CTNS-210ENST00000576979 CTNND2Q9UQB3 1225 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 NIP7Q9Y221 180 aaKnown RBP eCLIP6.38□□□□□ -1.39
CTNS-210ENST00000576979 MRFAP1Q9Y605 127 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 U3KQE9 123 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 ITIH6Q6UXX5 1313 aa6.38□□□□□ -1.39
CTNS-210ENST00000576979 BCL9LQ86UU0 1499 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 ZNF804BA4D1E1 1349 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 ZRANB2O95218 330 aaKnown RBP eCLIP6.37□□□□□ -1.39
CTNS-210ENST00000576979 NTSR2O95665 410 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 P4HBP07237 508 aaKnown RBP6.37□□□□□ -1.39
CTNS-210ENST00000576979 CALML3P27482 149 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 KIF5BP33176 963 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 CRKLP46109 303 aaKnown RBP6.37□□□□□ -1.39
CTNS-210ENST00000576979 NT5C2P49902 561 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 ATP2C1P98194 919 aaPredicted RBP6.37□□□□□ -1.39
CTNS-210ENST00000576979 RAD51AP2Q09MP3 1159 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 STIM1Q13586 685 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 CUL4BQ13620 913 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 BRD3Q15059 726 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 ZNF174Q15697 407 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 MLANAQ16655 118 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 PTPN21Q16825 1174 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 CDKAL1Q5VV42 579 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 C9orf131Q5VYM1 1079 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 TTLL10Q6ZVT0 673 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 TMTC3Q6ZXV5 915 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 TMTC1Q8IUR5 882 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 ENAHQ8N8S7 591 aaPredicted RBP6.37□□□□□ -1.39
CTNS-210ENST00000576979 C1orf127Q8N9H9 656 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 FAM181AQ8N9Y4 354 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 SPATA20Q8TB22 786 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 CPLX3Q8WVH0 158 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 CCDC47Q96A33 483 aaKnown RBP6.37□□□□□ -1.39
CTNS-210ENST00000576979 DESI2Q9BSY9 194 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 MKNK1Q9BUB5 465 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 GBP3Q9H0R5 595 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 ACBD3Q9H3P7 528 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 FAM105AQ9NUU6 356 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 ZNF446Q9NWS9 450 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 SEPT3Q9UH03 358 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 JAG2Q9Y219 1238 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 TMA7Q9Y2S6 64 aaKnown RBP6.37□□□□□ -1.39
CTNS-210ENST00000576979 FHOD1Q9Y613 1164 aa6.37□□□□□ -1.39
CTNS-210ENST00000576979 COL24A1Q17RW2 1714 aa6.36□□□□□ -1.39
CTNS-210ENST00000576979 CTAGE9A4FU28 777 aa6.36□□□□□ -1.39
CTNS-210ENST00000576979 ZNF503-AS2A6NEH8 195 aa6.36□□□□□ -1.39
CTNS-210ENST00000576979 SNAP23O00161 211 aa6.36□□□□□ -1.39
CTNS-210ENST00000576979 N4BP3O15049 544 aa6.36□□□□□ -1.39
CTNS-210ENST00000576979 ORC4O43929 436 aa6.36□□□□□ -1.39
CTNS-210ENST00000576979 PRDM1O75626 825 aa6.36□□□□□ -1.39
CTNS-210ENST00000576979 EIF3JO75822 258 aaKnown RBP6.36□□□□□ -1.39
CTNS-210ENST00000576979 CAMTA2O94983 1202 aa6.36□□□□□ -1.39
CTNS-210ENST00000576979 PLEKHA8P1O95397 391 aa6.36□□□□□ -1.39
CTNS-210ENST00000576979 TUBBP07437 444 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms