RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 EVPLQ92817 2033 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 IGKV6D-21A0A0A0MT36 114 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 BACH1O14867 736 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 HBP1O60381 514 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 CLASP2O75122 1294 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 DDAH1O94760 285 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 CCNE2O96020 404 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 VTNP04004 478 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 GSPT1P15170 499 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 ATP4AP20648 1035 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 KRT17Q04695 432 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 DSC3Q14574 896 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 ASTLQ6HA08 431 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 CES5AQ6NT32 575 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 ABHD15Q6UXT9 468 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 MRPL43Q8N983 215 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 FEZF2Q8TBJ5 459 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 CASP10Q92851 521 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 TMEM117Q9H0C3 514 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 ELAC1Q9H777 363 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 RNF19AQ9NV58 838 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 NFASCO94856 1347 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 FAM186AA6NE01 2351 aa11.54□□□□□ -0.56
NPLOC4-220ENST00000576940 DNAH14Q0VDD8 3507 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 C2orf71A6NGG8 1288 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 ZBTB42B2RXF5 422 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 NT5C1B-RDH14C9J2C7 533 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 PI15O43692 258 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 GPR32O75388 356 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 CA8P35219 290 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 ID4P47928 161 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 GNAQP50148 359 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 CRYBB1P53674 252 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 TPRNQ4KMQ1 711 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 CEP55Q53EZ4 464 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 ZNF484Q5JVG2 852 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 ODR4Q5SWX8 454 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 SWSAP1Q6NVH7 229 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 NFXL1Q6ZNB6 911 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 HEATR3Q7Z4Q2 680 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 CCDC60Q8IWA6 550 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 ADSSL1Q8N142 457 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 NKD2Q969F2 451 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 ZNF558Q96NG5 402 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 SPG21Q9NZD8 308 aa11.53□□□□□ -0.56
NPLOC4-220ENST00000576940 CCDC69A6NI79 296 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 MEIS1O00470 390 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 PRC1O43663 620 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 CXCL14O95715 111 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 CHMLP26374 656 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 SLC26A2P50443 739 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 ITIH3Q06033 890 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 SMC1AQ14683 1233 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 RARS2Q5T160 578 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 PDXDC2PQ6P474 469 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 CASC1Q6TDU7 716 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 METTL13Q8N6R0 699 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 RNF169Q8NCN4 708 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 FLCNQ8NFG4 579 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 ZNF668Q96K58 619 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 NECTIN4Q96NY8 510 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 MFSD1Q9H3U5 465 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 ZNF302Q9NR11 478 aa11.52□□□□□ -0.57
NPLOC4-220ENST00000576940 SH2B2O14492 632 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 DHX15O43143 795 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 C22orf31O95567 290 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 EPCAMP16422 314 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 ZSCAN20P17040 1043 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 NPR3P17342 541 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 MTHFRP42898 656 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 METAP2P50579 478 aaKnown RBP eCLIP11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 CLCN5P51795 746 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 CLLU1OSQ5K130 101 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 ATAT1Q5SQI0 421 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 TTC22Q5TAA0 569 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 FAM160B1Q5W0V3 765 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 WWC2Q6AWC2 1192 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 FAM43BQ6ZT52 329 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 ERMP1Q7Z2K6 904 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 ECHDC2Q86YB7 292 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 ZDHHC14Q8IZN3 488 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 ABI1Q8IZP0 508 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 SLC39A11Q8N1S5 342 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 RUFY2Q8WXA3 655 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 AUTS2Q8WXX7 1259 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 MAP4K1Q92918 833 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 LRRC2Q9BYS8 371 aa11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 DBR1Q9UK59 544 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-220ENST00000576940 HOXA2O43364 376 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 FGFR4P22455 802 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 PPM1AP35813 382 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 ZNF76P36508 570 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 CLCN3P51790 818 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 NLRP11P59045 1033 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 CWF19L1Q69YN2 538 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 MCTP2Q6DN12 878 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 MIS18BP1Q6P0N0 1132 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 TMTC3Q6ZXV5 915 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms