RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TMEM240Q5SV17 173 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 DTHD1Q6ZMT9 781 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 ZNF365Q70YC5 407 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 KIAA0319LQ8IZA0 1049 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 RDM1Q8NG50 284 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 LINC01599Q8WXQ3 324 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 TMEM143Q96AN5 459 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 EPSTI1Q96J88 318 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 CEP170P1Q96L14 293 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 OSMRQ99650 979 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 LBHD1Q9BQE6 289 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-215ENST00000576033 UBE2OQ9C0C9 1292 aaKnown RBP8.84□□□□□ -0.99
CCDC40-215ENST00000576033 AGO3Q9H9G7 860 aaKnown RBP8.84□□□□□ -0.99
CCDC40-215ENST00000576033 SUGCTQ9HAC7 445 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 CYP26B1Q9NR63 512 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 DDX19AQ9NUU7 478 aaKnown RBP8.84□□□□□ -0.99
CCDC40-215ENST00000576033 KIAA1024Q9UPX6 916 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 KIAA1671Q9BY89 1806 aa8.84□□□□□ -0.99
CCDC40-215ENST00000576033 NPHP3-ACAD11A0A0J9YXS1 232 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 GRXCR1A8MXD5 290 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 GOLGA6L22H0YM25 854 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 PITPNM1O00562 1244 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 GPR32O75388 356 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 IBSPP21815 317 aaPredicted RBP8.83□□□□□ -1
CCDC40-215ENST00000576033 CD52P31358 61 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 NASPP49321 788 aaPredicted RBP8.83□□□□□ -1
CCDC40-215ENST00000576033 RARRES1P49788 294 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 SLC26A2P50443 739 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 DEFB103AP81534 67 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 MRPS6P82932 125 aaKnown RBP8.83□□□□□ -1
CCDC40-215ENST00000576033 LPIN1Q14693 890 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 EMC2Q15006 297 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 XKR9Q5GH70 373 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 ZNF484Q5JVG2 852 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 EFCAB12Q6NXP0 572 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 SPRED2Q7Z698 418 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 C4orf19Q8IY42 314 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 LINC00301Q8NCQ3 95 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 CAGE1Q8TC20 777 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 ASAP3Q8TDY4 903 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 BSNDQ8WZ55 320 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 SYMPKQ92797 1274 aaKnown RBP8.83□□□□□ -1
CCDC40-215ENST00000576033 FAM167AQ96KS9 214 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 RUSC1Q9BVN2 902 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 RNF39Q9H2S5 420 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 ZSWIM4Q9H7M6 989 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 AKT3Q9Y243 479 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 PCDHA2Q9Y5H9 948 aa8.83□□□□□ -1
CCDC40-215ENST00000576033 COL4A4P53420 1690 aaPredicted RBP8.83□□□□□ -1
CCDC40-215ENST00000576033 MYH11P35749 1972 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 SMIM35A0A1B0GVV1 85 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 RRN3P2A6NIE6 340 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 RSPH10B2B2RC85 870 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 ARHGEF15O94989 841 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 EDN1P05305 212 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 RSPH10BP0C881 870 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 PLCG1P19174 1290 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 NCLP19338 710 aaKnown RBP8.82□□□□□ -1
CCDC40-215ENST00000576033 RPA1P27694 616 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 PRPHP41219 470 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 GPC3P51654 580 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 POLGP54098 1239 aaPredicted RBP8.82□□□□□ -1
CCDC40-215ENST00000576033 RAD51AP2Q09MP3 1159 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 TBC1D8BQ0IIM8 1120 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 BFSP2Q13515 415 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 GSE1Q14687 1217 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 STK38Q15208 465 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 TMEM119Q4V9L6 283 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 FBXO47Q5MNV8 452 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.82□□□□□ -1
CCDC40-215ENST00000576033 CABP7Q86V35 215 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 RHPN2Q8IUC4 686 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 TMEM199Q8N511 208 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 LRCH3Q96II8 777 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 NLRP4Q96MN2 994 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 POLR3CQ9BUI4 534 aaPredicted RBP8.82□□□□□ -1
CCDC40-215ENST00000576033 KIFC3Q9BVG8 833 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
CCDC40-215ENST00000576033 BHMT2Q9H2M3 363 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 ZSCAN16Q9H4T2 348 aaPredicted RBP8.82□□□□□ -1
CCDC40-215ENST00000576033 TUFT1Q9NNX1 390 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 IL23AQ9NPF7 189 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 USP20Q9Y2K6 914 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 ATP6V1DQ9Y5K8 247 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 TRPV2Q9Y5S1 764 aa8.82□□□□□ -1
CCDC40-215ENST00000576033 IGKV6-21A0A0C4DH24 114 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 FSD2A1L4K1 749 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 ZBBXA8MT70 800 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 LAD1O00515 517 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 MGEA5O60502 916 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 MAFO75444 373 aaPredicted RBP8.81□□□□□ -1
CCDC40-215ENST00000576033 LYPLA2O95372 231 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 CXCL10P02778 98 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 GNAT1P11488 350 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 MYOGP15173 224 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 PBX2P40425 430 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 RABGGTBP53611 331 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 NLRP11P59045 1033 aaKnown RBP8.81□□□□□ -1
CCDC40-215ENST00000576033 DHX8Q14562 1220 aaKnown RBP8.81□□□□□ -1
CCDC40-215ENST00000576033 SLC39A14Q15043 492 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms