RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 IKBKEQ14164 716 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 GPNMBQ14956 572 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 IL17AQ16552 155 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 USP38Q8NB14 1042 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 PIGOQ8TEQ8 1089 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 SCLT1Q96NL6 688 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 SQORQ9Y6N5 450 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 ZBTB39O15060 712 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 GAS2O43903 313 aaKnown RBP16.96■□□□□ 0.31
LITAF-217ENST00000575426 EFCAB14O75071 495 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 BAIAP3O94812 1187 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 VTNP04004 478 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 GHRP10912 638 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 KCNJ6P48051 423 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 MBTPS1Q14703 1052 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 ODR4Q5SWX8 454 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 POTEGQ6S5H5 508 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 DBF4BQ8NFT6 615 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 TCP11Q8WWU5 503 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 APBB2Q92870 758 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 AK8Q96MA6 479 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 CEP89Q96ST8 783 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 PPP1R16BQ96T49 567 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 MTRQ99707 1265 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 IFIH1Q9BYX4 1025 aaKnown RBP16.96■□□□□ 0.31
LITAF-217ENST00000575426 KIAA1024Q9UPX6 916 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 SLC4A7Q9Y6M7 1214 aa16.96■□□□□ 0.31
LITAF-217ENST00000575426 KDM3AQ9Y4C1 1321 aa16.96■□□□□ 0.3
LITAF-217ENST00000575426 A0A087WWV3 80 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 IGKV6-21A0A0C4DH24 114 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 ABHD14A-ACY1A0A1B0GW23 586 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 DGAT1O75907 488 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 CDC25AP30304 524 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 LONP1P36776 959 aaKnown RBP16.95■□□□□ 0.3
LITAF-217ENST00000575426 RARRES1P49788 294 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 CRYBB1P53674 252 aaPredicted RBP16.95■□□□□ 0.3
LITAF-217ENST00000575426 NLRP11P59045 1033 aaKnown RBP16.95■□□□□ 0.3
LITAF-217ENST00000575426 STK38Q15208 465 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 ZRSR1Q15695 479 aaKnown RBP16.95■□□□□ 0.3
LITAF-217ENST00000575426 KIZQ2M2Z5 673 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 LRIT3Q3SXY7 679 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 PLEKHG4Q58EX7 1191 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 FBXO47Q5MNV8 452 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 TSHZ1Q6ZSZ6 1077 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 LINC01465Q8N7H1 131 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 ZNF579Q8NAF0 562 aaKnown RBP16.95■□□□□ 0.3
LITAF-217ENST00000575426 USP28Q96RU2 1077 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 NT5C3AQ9H0P0 336 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 DHX33Q9H6R0 707 aaKnown RBP16.95■□□□□ 0.3
LITAF-217ENST00000575426 DDX19AQ9NUU7 478 aaKnown RBP16.95■□□□□ 0.3
LITAF-217ENST00000575426 SUCLA2Q9P2R7 463 aaPredicted RBP16.95■□□□□ 0.3
LITAF-217ENST00000575426 DBR1Q9UK59 544 aaKnown RBP16.95■□□□□ 0.3
LITAF-217ENST00000575426 DNM3Q9UQ16 869 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 TCHHQ07283 1943 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 MYH11P35749 1972 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 GBF1Q92538 1859 aa16.95■□□□□ 0.3
LITAF-217ENST00000575426 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.94■□□□□ 0.3
LITAF-217ENST00000575426 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.94■□□□□ 0.3
LITAF-217ENST00000575426 ARHGEF35A5YM69 484 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 PP2D1A8MPX8 630 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 MARCKSP29966 332 aaPredicted RBP16.94■□□□□ 0.3
LITAF-217ENST00000575426 UBA7P41226 1012 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 LPIN1Q14693 890 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 EMC2Q15006 297 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 PTPAQ15257 358 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 FOXD4L6Q3SYB3 417 aaPredicted RBP16.94■□□□□ 0.3
LITAF-217ENST00000575426 FOXD4L3Q6VB84 417 aaPredicted RBP16.94■□□□□ 0.3
LITAF-217ENST00000575426 CABP7Q86V35 215 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 NLRP7Q8WX94 980 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 VWCEQ96DN2 955 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 CALML4Q96GE6 196 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 ATP6V0A4Q9HBG4 840 aa16.94■□□□□ 0.3
LITAF-217ENST00000575426 BMP2KQ9NSY1 1161 aaPredicted RBP16.94■□□□□ 0.3
LITAF-217ENST00000575426 TFIP11Q9UBB9 837 aaKnown RBP16.94■□□□□ 0.3
LITAF-217ENST00000575426 ASAP2O43150 1006 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 SLC26A4O43511 780 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 GPR32O75388 356 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 RPS6KA5O75582 802 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 ANP32AP39687 249 aaKnown RBP16.93■□□□□ 0.3
LITAF-217ENST00000575426 PAK2Q13177 524 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 PKP1Q13835 747 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 SLC39A14Q15043 492 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 RASIP1Q5U651 963 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 ATL3Q6DD88 541 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 RHPN2Q8IUC4 686 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 KCTD17Q8N5Z5 321 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 RASSF8Q8NHQ8 419 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 PSPC1Q8WXF1 523 aaKnown RBP16.93■□□□□ 0.3
LITAF-217ENST00000575426 TMEM143Q96AN5 459 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 OSMRQ99650 979 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 GCOM2Q9BZD3 368 aaPredicted RBP16.93■□□□□ 0.3
LITAF-217ENST00000575426 CXXC1Q9P0U4 656 aaPredicted RBP16.93■□□□□ 0.3
LITAF-217ENST00000575426 CFAP45Q9UL16 551 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 ATP6V1DQ9Y5K8 247 aa16.93■□□□□ 0.3
LITAF-217ENST00000575426 SRPRBQ9Y5M8 271 aaKnown RBP16.93■□□□□ 0.3
LITAF-217ENST00000575426 GPR182O15218 404 aa16.92■□□□□ 0.3
LITAF-217ENST00000575426 USO1O60763 962 aaKnown RBP16.92■□□□□ 0.3
LITAF-217ENST00000575426 CD52P31358 61 aa16.92■□□□□ 0.3
LITAF-217ENST00000575426 GPC3P51654 580 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms