RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 FOXD4L1Q9NU39 408 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 SIP14410 1827 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 VPS37CA5D8V6 355 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 TLL1O43897 1013 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 PDCP20941 246 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 MKRN4PQ13434 485 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 TMEM266Q2M3C6 531 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 RILPL1Q5EBL4 403 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 FAM117BQ6P1L5 589 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 OTUD6AQ7L8S5 288 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 HSCBQ8IWL3 235 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 SNX21Q969T3 373 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 OSMRQ99650 979 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 HSD17B14Q9BPX1 270 aa23.17■■□□□ 1.3
HCFC1R1-208ENST00000575214 CRYBB1P53674 252 aaPredicted RBP23.16■■□□□ 1.3
HCFC1R1-208ENST00000575214 NLRP11P59045 1033 aaKnown RBP23.16■■□□□ 1.3
HCFC1R1-208ENST00000575214 PTGDRQ13258 359 aa23.16■■□□□ 1.3
HCFC1R1-208ENST00000575214 PPP2R2DQ66LE6 453 aa23.16■■□□□ 1.3
HCFC1R1-208ENST00000575214 C4orf32Q8N8J7 132 aa23.16■■□□□ 1.3
HCFC1R1-208ENST00000575214 SCLT1Q96NL6 688 aa23.16■■□□□ 1.3
HCFC1R1-208ENST00000575214 JPH2Q9BR39 696 aaPredicted RBP23.16■■□□□ 1.3
HCFC1R1-208ENST00000575214 PADI3Q9ULW8 664 aa23.16■■□□□ 1.3
HCFC1R1-208ENST00000575214 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 GPR32O75388 356 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 MAFO75444 373 aaPredicted RBP23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 RPS6KA5O75582 802 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 GJB5O95377 273 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 CA3P07451 260 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 DNM2P50570 870 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 NFX1Q12986 1120 aaKnown RBP23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 DRP2Q13474 957 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 XKR9Q5GH70 373 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 ZNF579Q8NAF0 562 aaKnown RBP23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 ERMNQ8TAM6 284 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 TMEM40Q8WWA1 233 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 SLC7A3Q8WY07 619 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 ZNF668Q96K58 619 aaPredicted RBP23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 GUCD1Q96NT3 240 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 NOC2LQ9Y3T9 749 aaKnown RBP23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 PPME1Q9Y570 386 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 EVPLQ92817 2033 aa23.15■■□□□ 1.3
HCFC1R1-208ENST00000575214 IGKV6-21A0A0C4DH24 114 aa23.14■■□□□ 1.3
HCFC1R1-208ENST00000575214 ZBTB39O15060 712 aa23.14■■□□□ 1.3
HCFC1R1-208ENST00000575214 POLGP54098 1239 aaPredicted RBP23.14■■□□□ 1.3
HCFC1R1-208ENST00000575214 ZNF710Q8N1W2 664 aa23.14■■□□□ 1.3
HCFC1R1-208ENST00000575214 CCDC43Q96MW1 224 aaKnown RBP23.14■■□□□ 1.3
HCFC1R1-208ENST00000575214 FTHL17Q9BXU8 183 aa23.14■■□□□ 1.3
HCFC1R1-208ENST00000575214 MICAL3Q7RTP6 2002 aa23.14■■□□□ 1.3
HCFC1R1-208ENST00000575214 LAD1O00515 517 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 UPP2O95045 317 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 LYPLA2O95372 231 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 RFC5P40937 340 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 GPC3P51654 580 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 ODR4Q5SWX8 454 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 EXOC8Q8IYI6 725 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 NLRP7Q8WX94 980 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 RAD9AQ99638 391 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 ADAMTS10Q9H324 1103 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 TUFT1Q9NNX1 390 aa23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 BMP2KQ9NSY1 1161 aaPredicted RBP23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 SUCLA2Q9P2R7 463 aaPredicted RBP23.14■■□□□ 1.29
HCFC1R1-208ENST00000575214 GBF1Q92538 1859 aa23.13■■□□□ 1.29
HCFC1R1-208ENST00000575214 FXR2P51116 673 aaKnown RBP eCLIP23.13■■□□□ 1.29
HCFC1R1-208ENST00000575214 GRIN2CQ14957 1233 aa23.13■■□□□ 1.29
HCFC1R1-208ENST00000575214 BRAPQ7Z569 592 aa23.13■■□□□ 1.29
HCFC1R1-208ENST00000575214 FERMT3Q86UX7 667 aa23.13■■□□□ 1.29
HCFC1R1-208ENST00000575214 TOP1MTQ969P6 601 aa23.13■■□□□ 1.29
HCFC1R1-208ENST00000575214 CDX2Q99626 313 aaPredicted RBP23.13■■□□□ 1.29
HCFC1R1-208ENST00000575214 DHX33Q9H6R0 707 aaKnown RBP23.13■■□□□ 1.29
HCFC1R1-208ENST00000575214 ERVK-5Q9HDB9 667 aa23.13■■□□□ 1.29
HCFC1R1-208ENST00000575214 PTPRSQ13332 1948 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 ENPP3O14638 875 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 GPR182O15218 404 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 MED24O75448 989 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 SPATA31C1P0DKV0 1188 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 SYT1P21579 422 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 HAUS3Q68CZ6 603 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 FAM228AQ86W67 206 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 CATSPER3Q86XQ3 398 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 RHPN2Q8IUC4 686 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 PIGOQ8TEQ8 1089 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 LINC01599Q8WXQ3 324 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 POLR3CQ9BUI4 534 aaPredicted RBP23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 RAB34Q9BZG1 259 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 ANKEF1Q9NU02 776 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 LRWD1Q9UFC0 647 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 ST3GAL5Q9UNP4 418 aa23.12■■□□□ 1.29
HCFC1R1-208ENST00000575214 LCHNA4D1U4 455 aa23.11■■□□□ 1.29
HCFC1R1-208ENST00000575214 PRPHP41219 470 aa23.11■■□□□ 1.29
HCFC1R1-208ENST00000575214 CDC42EP1Q00587 391 aa23.11■■□□□ 1.29
HCFC1R1-208ENST00000575214 EMC2Q15006 297 aa23.11■■□□□ 1.29
HCFC1R1-208ENST00000575214 MYLIPQ8WY64 445 aa23.11■■□□□ 1.29
HCFC1R1-208ENST00000575214 TMX1Q9H3N1 280 aa23.11■■□□□ 1.29
HCFC1R1-208ENST00000575214 INSL6Q9Y581 213 aa23.11■■□□□ 1.29
HCFC1R1-208ENST00000575214 A0A087WWV3 80 aa23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 GAS2O43903 313 aaKnown RBP23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 HSP90AA1P07900 732 aaKnown RBP23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 EIF4BP23588 611 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms