RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 SPICE1Q8N0Z3 855 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 MYCT1Q8N699 235 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 EIF1ADQ8N9N8 165 aaKnown RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 SLC30A5Q8TAD4 765 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 PRMT6Q96LA8 375 aaPredicted RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 CCDC43Q96MW1 224 aaKnown RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 RUFY1Q96T51 708 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 MKNK1Q9BUB5 465 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 IKZF4Q9H2S9 585 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 FRMPD4Q14CM0 1322 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 GCOM1H8Y6P7 765 aaPredicted RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 H2AFZP0C0S5 128 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 POLR2MP0CAP2 368 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 STAT1P42224 750 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 ECE1P42892 770 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 PRELPP51888 382 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 STAT2P52630 851 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 ZNF131P52739 623 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 ZC2HC1CQ53FD0 456 aaPredicted RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 SLC30A10Q6XR72 485 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 H2AFVQ71UI9 128 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 VPS36Q86VN1 386 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 WHAMMQ8TF30 809 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 CAPS2Q9BXY5 557 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 ISCUQ9H1K1 167 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 RANBP17Q9H2T7 1088 aaKnown RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 PARVGQ9HBI0 331 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 DMAC2Q9NW81 257 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 SEL1LQ9UBV2 794 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 TMX2Q9Y320 296 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 RBBP6Q7Z6E9 1792 aaKnown RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 SHTN1A0MZ66 631 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 ZBTB39O15060 712 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 TRADDQ15628 312 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 CFAP58Q5T655 872 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 CC2D2BQ6DHV5 1058 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 ZNF720Q7Z2F6 126 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 KLHL7Q8IXQ5 586 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 RASGEF1CQ8N431 466 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 LNX1Q8TBB1 728 aaPredicted RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 LMBR1Q8WVP7 490 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 CALR3Q96L12 384 aaKnown RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 CSRNP1Q96S65 589 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 STK33Q9BYT3 514 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 GOLPH3Q9H4A6 298 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 PLEKHA4Q9H4M7 779 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 ARHGEF10LQ9HCE6 1279 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 SUCLA2Q9P2R7 463 aaPredicted RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 RSPH14Q9UHP6 348 aa9.76□□□□□ -0.85
NCBP3-204ENST00000574911 HERC5Q9UII4 1024 aaKnown RBP9.76□□□□□ -0.85
NCBP3-204ENST00000574911 GRIN2DO15399 1336 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 ZNF233A6NK53 670 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 TRIM66O15016 1216 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 CHMP2AO43633 222 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 CEP104O60308 925 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 CFBP00751 764 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 VIL1P09327 827 aaKnown RBP9.75□□□□□ -0.85
NCBP3-204ENST00000574911 SOX5P35711 763 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 FMO5P49326 533 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 COG2Q14746 738 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 AOC3Q16853 763 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 B3GNT9Q6UX72 402 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 METTL13Q8N6R0 699 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 ACER1Q8TDN7 264 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 U2AF1L4Q8WU68 220 aaKnown RBP9.75□□□□□ -0.85
NCBP3-204ENST00000574911 NACC1Q96RE7 527 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.75□□□□□ -0.851e-7■■■■□ 21.1
NCBP3-204ENST00000574911 TAF1DQ9H5J8 278 aaPredicted RBP9.75□□□□□ -0.85
NCBP3-204ENST00000574911 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.75□□□□□ -0.85
NCBP3-204ENST00000574911 F8VZ95 297 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 H0YIN7 160 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 PGRMC1O00264 195 aaKnown RBP9.75□□□□□ -0.85
NCBP3-204ENST00000574911 EIF3HO15372 352 aaKnown RBP eCLIP9.75□□□□□ -0.854e-8■■■□□ 19.2
NCBP3-204ENST00000574911 EVI5O60447 810 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 ECHS1P30084 290 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 HSPA9P38646 679 aaKnown RBP9.75□□□□□ -0.85
NCBP3-204ENST00000574911 GUCY2FP51841 1108 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 ERVK-9P63128 1117 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 SLC20A2Q08357 652 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 NT5DC3Q86UY8 548 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 SYCE1Q8N0S2 351 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 C1orf131Q8NDD1 294 aaKnown RBP9.75□□□□□ -0.85
NCBP3-204ENST00000574911 C7orf43Q8WVR3 580 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 SYT11Q9BT88 431 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 GPR88Q9GZN0 384 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 UNC45AQ9H3U1 944 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 AGPAT3Q9NRZ7 376 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 KCND2Q9NZV8 630 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 WRAP73Q9P2S5 460 aaPredicted RBP9.75□□□□□ -0.85
NCBP3-204ENST00000574911 ODF2LQ9ULJ1 636 aa9.75□□□□□ -0.85
NCBP3-204ENST00000574911 NCANO14594 1321 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 PLSCR1O15162 318 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 PPP1R12BO60237 982 aaPredicted RBP9.74□□□□□ -0.85
NCBP3-204ENST00000574911 GAS7O60861 476 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 LMNB1P20700 586 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 GALCP54803 685 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 GNGT1P63211 74 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 CUL1Q13616 776 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms