RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 EVPLQ92817 2033 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 ARHGEF35A5YM69 484 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 RSPH10B2B2RC85 870 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 USO1O60763 962 aaKnown RBP18.13■□□□□ 0.49
PFN1-203ENST00000574872 MAFO75444 373 aaPredicted RBP18.13■□□□□ 0.49
PFN1-203ENST00000574872 VTNP04004 478 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 RSPH10BP0C881 870 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 MUTP22033 750 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 MRPS6P82932 125 aaKnown RBP18.13■□□□□ 0.49
PFN1-203ENST00000574872 EMC2Q15006 297 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 TRAF7Q6Q0C0 670 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 DEFB128Q7Z7B8 93 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 SLC7A3Q8WY07 619 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 CALML4Q96GE6 196 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 ZNF668Q96K58 619 aaPredicted RBP18.13■□□□□ 0.49
PFN1-203ENST00000574872 SPATA32Q96LK8 384 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 MAP7D2Q96T17 732 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 BHMT2Q9H2M3 363 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 GDPD2Q9HCC8 539 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 DBR1Q9UK59 544 aaKnown RBP18.13■□□□□ 0.49
PFN1-203ENST00000574872 RCOR1Q9UKL0 485 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 DNM3Q9UQ16 869 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 GINS2Q9Y248 185 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 CDY2AQ9Y6F7 541 aa18.13■□□□□ 0.49
PFN1-203ENST00000574872 ARID2Q68CP9 1835 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 CHRNA1P02708 482 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 ACRP10323 421 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 XRCC6P12956 609 aaKnown RBP eCLIP18.12■□□□□ 0.49
PFN1-203ENST00000574872 PLCG1P19174 1290 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 TMOD1P28289 359 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 RFC5P40937 340 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 EPHB4P54760 987 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 MKRN4PQ13434 485 aaPredicted RBP18.12■□□□□ 0.49
PFN1-203ENST00000574872 MBTPS1Q14703 1052 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 TPRNQ4KMQ1 711 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 TMEM119Q4V9L6 283 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 HYIQ5T013 277 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 RPAINQ86UA6 219 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 LINC01465Q8N7H1 131 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 TMEM143Q96AN5 459 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 DHX33Q9H6R0 707 aaKnown RBP18.12■□□□□ 0.49
PFN1-203ENST00000574872 CHMP5Q9NZZ3 219 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 PCDHA7Q9UN72 937 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 PPME1Q9Y570 386 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 TANC1Q9C0D5 1861 aa18.12■□□□□ 0.49
PFN1-203ENST00000574872 IGKV6-21A0A0C4DH24 114 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 CUTAO60888 179 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 CAND2O75155 1236 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 SSBP05455 408 aaKnown RBP eCLIP18.11■□□□□ 0.49
PFN1-203ENST00000574872 TXLNAP40222 546 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 MGAT3Q09327 533 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 PPIGQ13427 754 aaKnown RBP eCLIP18.11■□□□□ 0.49
PFN1-203ENST00000574872 KIZQ2M2Z5 673 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 AXDND1Q5T1B0 1012 aaPredicted RBP18.11■□□□□ 0.49
PFN1-203ENST00000574872 PADI6Q6TGC4 694 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 CHRDL2Q6WN34 429 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 MAEAQ7L5Y9 396 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 LRRC15Q8TF66 581 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 MTRQ99707 1265 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
PFN1-203ENST00000574872 OSBPL7Q9BZF2 842 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 CCSER1Q9C0I3 900 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 NT5C3AQ9H0P0 336 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 ATP6V0A4Q9HBG4 840 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 XPNPEP1Q9NQW7 623 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 SUCLA2Q9P2R7 463 aaPredicted RBP18.11■□□□□ 0.49
PFN1-203ENST00000574872 TRPV2Q9Y5S1 764 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 SCN5AQ14524 2016 aa18.11■□□□□ 0.49
PFN1-203ENST00000574872 M0QZ92 97 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 NBNO60934 754 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 DGAT1O75907 488 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 EYA4O95677 639 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 DNM2P50570 870 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 GPNMBQ14956 572 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 FAM26DQ5JW98 314 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 IER5Q5VY09 327 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 SHC4Q6S5L8 630 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 NME8Q8N427 588 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 SCLT1Q96NL6 688 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 GDF15Q99988 308 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 PANK2Q9BZ23 570 aa18.1■□□□□ 0.49
PFN1-203ENST00000574872 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
PFN1-203ENST00000574872 SCAND2PQ9GZW5 306 aaPredicted RBP18.1■□□□□ 0.49
PFN1-203ENST00000574872 SLC26A4O43511 780 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 RPLP2P05387 115 aaKnown RBP18.09■□□□□ 0.49
PFN1-203ENST00000574872 GHRP10912 638 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 NLRP11P59045 1033 aaKnown RBP18.09■□□□□ 0.49
PFN1-203ENST00000574872 DHX8Q14562 1220 aaKnown RBP18.09■□□□□ 0.49
PFN1-203ENST00000574872 PRPF38BQ5VTL8 546 aaKnown RBP18.09■□□□□ 0.49
PFN1-203ENST00000574872 RHPN2Q8IUC4 686 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 KSR1Q8IVT5 923 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 EXOC8Q8IYI6 725 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 VWCEQ96DN2 955 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 OSMRQ99650 979 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 RUSC1Q9BVN2 902 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 CELF4Q9BZC1 486 aaKnown RBP18.09■□□□□ 0.49
PFN1-203ENST00000574872 CDHR5Q9HBB8 845 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 IL23AQ9NPF7 189 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 GPRC5CQ9NQ84 441 aa18.09■□□□□ 0.49
PFN1-203ENST00000574872 CCDC39Q9UFE4 941 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms