RNA–Protein interactions for RNA: ENST00000574703.5

LITAF-214, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-214ENST00000574703 LAMA3Q16787 3333 aa18.07■□□□□ 0.48
LITAF-214ENST00000574703 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.06■□□□□ 0.48
LITAF-214ENST00000574703 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.06■□□□□ 0.48
LITAF-214ENST00000574703 VTNP04004 478 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 GHRP10912 638 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 CCT6AP40227 531 aaKnown RBP18.06■□□□□ 0.48
LITAF-214ENST00000574703 POLGP54098 1239 aaPredicted RBP18.06■□□□□ 0.48
LITAF-214ENST00000574703 CDC42EP1Q00587 391 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 LPIN1Q14693 890 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 KRT79Q5XKE5 535 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 FAM173BQ6P4H8 233 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 TSHZ1Q6ZSZ6 1077 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 TET1Q8NFU7 2136 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 APBB2Q92870 758 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 IFIH1Q9BYX4 1025 aaKnown RBP18.06■□□□□ 0.48
LITAF-214ENST00000574703 OSBPL7Q9BZF2 842 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 DHX33Q9H6R0 707 aaKnown RBP18.06■□□□□ 0.48
LITAF-214ENST00000574703 EVPLQ92817 2033 aa18.06■□□□□ 0.48
LITAF-214ENST00000574703 VWA3AA6NCI4 1184 aa18.05■□□□□ 0.48
LITAF-214ENST00000574703 GAS2O43903 313 aaKnown RBP18.05■□□□□ 0.48
LITAF-214ENST00000574703 ZSCAN22P10073 491 aaPredicted RBP18.05■□□□□ 0.48
LITAF-214ENST00000574703 RARRES1P49788 294 aa18.05■□□□□ 0.48
LITAF-214ENST00000574703 FXR1P51114 621 aaKnown RBP eCLIP18.05■□□□□ 0.48
LITAF-214ENST00000574703 CRYBB1P53674 252 aaPredicted RBP18.05■□□□□ 0.48
LITAF-214ENST00000574703 SMAD3P84022 425 aaKnown RBP18.05■□□□□ 0.48
LITAF-214ENST00000574703 KIZQ2M2Z5 673 aa18.05■□□□□ 0.48
LITAF-214ENST00000574703 TCTN1Q2MV58 587 aa18.05■□□□□ 0.48
LITAF-214ENST00000574703 PHOSPHO2Q8TCD6 241 aa18.05■□□□□ 0.48
LITAF-214ENST00000574703 SNX29Q8TEQ0 813 aa18.05■□□□□ 0.48
LITAF-214ENST00000574703 PIGOQ8TEQ8 1089 aa18.05■□□□□ 0.48
LITAF-214ENST00000574703 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
LITAF-214ENST00000574703 DBR1Q9UK59 544 aaKnown RBP18.05■□□□□ 0.48
LITAF-214ENST00000574703 GINS2Q9Y248 185 aa18.05■□□□□ 0.48
LITAF-214ENST00000574703 CLIC4Q9Y696 253 aa18.05■□□□□ 0.48
LITAF-214ENST00000574703 GPR32O75388 356 aa18.04■□□□□ 0.48
LITAF-214ENST00000574703 KCNJ6P48051 423 aa18.04■□□□□ 0.48
LITAF-214ENST00000574703 NLRP11P59045 1033 aaKnown RBP18.04■□□□□ 0.48
LITAF-214ENST00000574703 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
LITAF-214ENST00000574703 POTEGQ6S5H5 508 aa18.04■□□□□ 0.48
LITAF-214ENST00000574703 FAM43BQ6ZT52 329 aaPredicted RBP18.04■□□□□ 0.48
LITAF-214ENST00000574703 AK8Q96MA6 479 aa18.04■□□□□ 0.48
LITAF-214ENST00000574703 CDHR5Q9HBB8 845 aa18.04■□□□□ 0.48
LITAF-214ENST00000574703 SUCLA2Q9P2R7 463 aaPredicted RBP18.04■□□□□ 0.48
LITAF-214ENST00000574703 PP2D1A8MPX8 630 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 SOX1O00570 391 aaPredicted RBP18.03■□□□□ 0.48
LITAF-214ENST00000574703 DGAT1O75907 488 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 ATP2A2P16615 1042 aaKnown RBP18.03■□□□□ 0.48
LITAF-214ENST00000574703 CDC25AP30304 524 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 GPC3P51654 580 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 WDR5P61964 334 aaKnown RBP18.03■□□□□ 0.48
LITAF-214ENST00000574703 DRP2Q13474 957 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 PTPAQ15257 358 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 ECM1Q16610 540 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 ODR4Q5SWX8 454 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 TCP11Q8WWU5 503 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 SLC9A7Q96T83 725 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 MTRQ99707 1265 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 ADAMTS10Q9H324 1103 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 AGO3Q9H9G7 860 aaKnown RBP18.03■□□□□ 0.48
LITAF-214ENST00000574703 PADI3Q9ULW8 664 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 KIAA1024Q9UPX6 916 aa18.03■□□□□ 0.48
LITAF-214ENST00000574703 LAMA2P24043 3122 aaKnown RBP18.03■□□□□ 0.48
LITAF-214ENST00000574703 A0A087WWV3 80 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 RPS6KA5O75582 802 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 F13A1P00488 732 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 CD52P31358 61 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 LONP1P36776 959 aaKnown RBP18.02■□□□□ 0.48
LITAF-214ENST00000574703 CEBPZQ03701 1054 aaKnown RBP18.02■□□□□ 0.48
LITAF-214ENST00000574703 PAK2Q13177 524 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 EMC2Q15006 297 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 FOXD4L5Q5VV16 416 aaPredicted RBP18.02■□□□□ 0.48
LITAF-214ENST00000574703 FAM109BQ6ICB4 259 aaPredicted RBP18.02■□□□□ 0.48
LITAF-214ENST00000574703 KCTD17Q8N5Z5 321 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 PSPC1Q8WXF1 523 aaKnown RBP18.02■□□□□ 0.48
LITAF-214ENST00000574703 FOXD4L4Q8WXT5 416 aaPredicted RBP18.02■□□□□ 0.48
LITAF-214ENST00000574703 LRCH3Q96II8 777 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 ZNF396Q96N95 335 aaPredicted RBP18.02■□□□□ 0.48
LITAF-214ENST00000574703 USP28Q96RU2 1077 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 PPP1R16BQ96T49 567 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 OSMRQ99650 979 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 MMTAG2Q9BU76 263 aaKnown RBP18.02■□□□□ 0.48
LITAF-214ENST00000574703 FTHL17Q9BXU8 183 aa18.02■□□□□ 0.48
LITAF-214ENST00000574703 DDX19AQ9NUU7 478 aaKnown RBP18.02■□□□□ 0.48
LITAF-214ENST00000574703 SIP14410 1827 aa18.02■□□□□ 0.47
LITAF-214ENST00000574703 ARHGEF35A5YM69 484 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 GPR182O15218 404 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 ASAP2O43150 1006 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 SLC26A4O43511 780 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 EIF4BP23588 611 aaKnown RBP18.01■□□□□ 0.47
LITAF-214ENST00000574703 PKP1Q13835 747 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 SLC39A14Q15043 492 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 HYIQ5T013 277 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 ZNF410Q86VK4 478 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 RHPN2Q8IUC4 686 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 TMEM40Q8WWA1 233 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 PRPF31Q8WWY3 499 aaKnown RBP18.01■□□□□ 0.47
LITAF-214ENST00000574703 NLRP7Q8WX94 980 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 TMEM143Q96AN5 459 aa18.01■□□□□ 0.47
LITAF-214ENST00000574703 SCLT1Q96NL6 688 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms