RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 MICALL1Q8N3F8 863 aa22.16■■□□□ 1.14
SCARF1-208ENST00000574545 ADAMTS10Q9H324 1103 aa22.16■■□□□ 1.14
SCARF1-208ENST00000574545 ST3GAL5Q9UNP4 418 aa22.16■■□□□ 1.14
SCARF1-208ENST00000574545 GINS2Q9Y248 185 aa22.16■■□□□ 1.14
SCARF1-208ENST00000574545 COL4A4P53420 1690 aaPredicted RBP22.16■■□□□ 1.14
SCARF1-208ENST00000574545 MUC3AQ02505 3323 aa22.16■■□□□ 1.14
SCARF1-208ENST00000574545 IGKV6-21A0A0C4DH24 114 aa22.15■■□□□ 1.14
SCARF1-208ENST00000574545 MGEA5O60502 916 aa22.15■■□□□ 1.14
SCARF1-208ENST00000574545 SPIRE1Q08AE8 756 aa22.15■■□□□ 1.14
SCARF1-208ENST00000574545 FAM228AQ86W67 206 aa22.15■■□□□ 1.14
SCARF1-208ENST00000574545 CCDC83Q8IWF9 413 aa22.15■■□□□ 1.14
SCARF1-208ENST00000574545 TMEM192Q8IY95 271 aa22.15■■□□□ 1.14
SCARF1-208ENST00000574545 DIS3L2Q8IYB7 885 aaKnown RBP22.15■■□□□ 1.14
SCARF1-208ENST00000574545 LRRC71Q8N4P6 559 aa22.15■■□□□ 1.14
SCARF1-208ENST00000574545 ATXN2LQ8WWM7 1075 aaKnown RBP22.15■■□□□ 1.14
SCARF1-208ENST00000574545 OSMRQ99650 979 aa22.15■■□□□ 1.14
SCARF1-208ENST00000574545 BRMS1Q9HCU9 246 aa22.15■■□□□ 1.14
SCARF1-208ENST00000574545 TMEM150BA6NC51 233 aa22.14■■□□□ 1.13
SCARF1-208ENST00000574545 WNT7AO00755 349 aa22.14■■□□□ 1.13
SCARF1-208ENST00000574545 PSMC5P62195 406 aa22.14■■□□□ 1.13
SCARF1-208ENST00000574545 NFX1Q12986 1120 aaKnown RBP22.14■■□□□ 1.13
SCARF1-208ENST00000574545 ANO5Q75V66 913 aa22.14■■□□□ 1.13
SCARF1-208ENST00000574545 FIBCD1Q8N539 461 aa22.14■■□□□ 1.13
SCARF1-208ENST00000574545 BANK1Q8NDB2 785 aa22.14■■□□□ 1.13
SCARF1-208ENST00000574545 FBXO22Q8NEZ5 403 aa22.14■■□□□ 1.13
SCARF1-208ENST00000574545 PPP1R16BQ96T49 567 aa22.14■■□□□ 1.13
SCARF1-208ENST00000574545 LLPHQ9BRT6 129 aaKnown RBP22.14■■□□□ 1.13
SCARF1-208ENST00000574545 THEGQ9P2T0 379 aa22.14■■□□□ 1.13
SCARF1-208ENST00000574545 ADGRA3Q8IWK6 1321 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 H3BNC9 293 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 GPR182O15218 404 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 TMOD1P28289 359 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 GPC3P51654 580 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 NLRP11P59045 1033 aaKnown RBP22.13■■□□□ 1.13
SCARF1-208ENST00000574545 DRP2Q13474 957 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 EPHA7Q15375 998 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 NPAS4Q8IUM7 802 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 ZNF710Q8N1W2 664 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 CLP1Q92989 425 aaKnown RBP22.13■■□□□ 1.13
SCARF1-208ENST00000574545 ZSCAN31Q96LW9 406 aaPredicted RBP22.13■■□□□ 1.13
SCARF1-208ENST00000574545 RGS18Q9NS28 235 aa22.13■■□□□ 1.13
SCARF1-208ENST00000574545 WRAP73Q9P2S5 460 aaPredicted RBP22.13■■□□□ 1.13
SCARF1-208ENST00000574545 C5orf67F2Z3F1 127 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 QARSP47897 775 aaKnown RBP22.12■■□□□ 1.13
SCARF1-208ENST00000574545 TBC1D8BQ0IIM8 1120 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 DSC3Q14574 896 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 MTERF2Q49AM1 385 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 TJAP1Q5JTD0 557 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 ODR4Q5SWX8 454 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 MAP7D2Q96T17 732 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 SH2D3AQ9BRG2 576 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 SEPT9Q9UHD8 586 aaPredicted RBP22.12■■□□□ 1.13
SCARF1-208ENST00000574545 AKT3Q9Y243 479 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 BRWD1Q9NSI6 2320 aa22.12■■□□□ 1.13
SCARF1-208ENST00000574545 C9IYK1 514 aa22.11■■□□□ 1.13
SCARF1-208ENST00000574545 MAFO75444 373 aaPredicted RBP22.11■■□□□ 1.13
SCARF1-208ENST00000574545 P4HBP07237 508 aaKnown RBP22.11■■□□□ 1.13
SCARF1-208ENST00000574545 SARSP49591 514 aaKnown RBP22.11■■□□□ 1.13
SCARF1-208ENST00000574545 FOSBP53539 338 aa22.11■■□□□ 1.13
SCARF1-208ENST00000574545 FAM189BP81408 668 aa22.11■■□□□ 1.13
SCARF1-208ENST00000574545 SLFN12Q8IYM2 578 aa22.11■■□□□ 1.13
SCARF1-208ENST00000574545 ASB2Q96Q27 587 aa22.11■■□□□ 1.13
SCARF1-208ENST00000574545 ADAM2Q99965 735 aa22.11■■□□□ 1.13
SCARF1-208ENST00000574545 SH2B1Q9NRF2 756 aaPredicted RBP22.11■■□□□ 1.13
SCARF1-208ENST00000574545 DDX11L8A8MPP1 907 aa22.1■■□□□ 1.13
SCARF1-208ENST00000574545 RB1P06400 928 aa22.1■■□□□ 1.13
SCARF1-208ENST00000574545 STAG3L1P0CL83 205 aa22.1■■□□□ 1.13
SCARF1-208ENST00000574545 EIF4BP23588 611 aaKnown RBP22.1■■□□□ 1.13
SCARF1-208ENST00000574545 BMPR1AP36894 532 aa22.1■■□□□ 1.13
SCARF1-208ENST00000574545 MRPS5P82675 430 aaKnown RBP22.1■■□□□ 1.13
SCARF1-208ENST00000574545 GPM6BQ13491 265 aa22.1■■□□□ 1.13
SCARF1-208ENST00000574545 TRIM29Q14134 588 aa22.1■■□□□ 1.13
SCARF1-208ENST00000574545 BTG3Q14201 252 aaPredicted RBP22.1■■□□□ 1.13
SCARF1-208ENST00000574545 NLRC5Q86WI3 1866 aa22.1■■□□□ 1.13
SCARF1-208ENST00000574545 C1orf112Q9NSG2 853 aa22.1■■□□□ 1.13
SCARF1-208ENST00000574545 MYO7AQ13402 2215 aa22.1■■□□□ 1.13
SCARF1-208ENST00000574545 RALGAPA2Q2PPJ7 1873 aa22.09■■□□□ 1.13
SCARF1-208ENST00000574545 BAG4O95429 457 aaKnown RBP22.09■■□□□ 1.13
SCARF1-208ENST00000574545 GUCY1B3Q02153 619 aa22.09■■□□□ 1.13
SCARF1-208ENST00000574545 SLC24A5Q71RS6 500 aa22.09■■□□□ 1.13
SCARF1-208ENST00000574545 C4orf19Q8IY42 314 aa22.09■■□□□ 1.13
SCARF1-208ENST00000574545 CMTR2Q8IYT2 770 aaKnown RBP22.09■■□□□ 1.13
SCARF1-208ENST00000574545 ZNF579Q8NAF0 562 aaKnown RBP22.09■■□□□ 1.13
SCARF1-208ENST00000574545 MRPL38Q96DV4 380 aaKnown RBP22.09■■□□□ 1.13
SCARF1-208ENST00000574545 ZNF668Q96K58 619 aaPredicted RBP22.09■■□□□ 1.13
SCARF1-208ENST00000574545 MTMR9Q96QG7 549 aa22.09■■□□□ 1.13
SCARF1-208ENST00000574545 CYP26B1Q9NR63 512 aa22.09■■□□□ 1.13
SCARF1-208ENST00000574545 RGL1Q9NZL6 768 aa22.09■■□□□ 1.13
SCARF1-208ENST00000574545 DKC1O60832 514 aaKnown RBP eCLIP22.08■■□□□ 1.13
SCARF1-208ENST00000574545 SLITRK3O94933 977 aa22.08■■□□□ 1.13
SCARF1-208ENST00000574545 DARSP14868 501 aaKnown RBP22.08■■□□□ 1.13
SCARF1-208ENST00000574545 GATMP50440 423 aa22.08■■□□□ 1.13
SCARF1-208ENST00000574545 NPEPPSP55786 919 aa22.08■■□□□ 1.13
SCARF1-208ENST00000574545 PLA2G4FQ68DD2 849 aa22.08■■□□□ 1.13
SCARF1-208ENST00000574545 FBXO18Q8NFZ0 1043 aa22.08■■□□□ 1.13
SCARF1-208ENST00000574545 SYMPKQ92797 1274 aaKnown RBP22.08■■□□□ 1.13
SCARF1-208ENST00000574545 HSD17B14Q9BPX1 270 aa22.08■■□□□ 1.13
SCARF1-208ENST00000574545 LXNQ9BS40 222 aa22.08■■□□□ 1.13
SCARF1-208ENST00000574545 COG5Q9UP83 839 aa22.08■■□□□ 1.13
SCARF1-208ENST00000574545 RWDD3Q9Y3V2 267 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms