RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 HBP1O60381 514 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 ADAMTS4O75173 837 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 DGAT1O75907 488 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 POLGP54098 1239 aaPredicted RBP26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 SOX10P56693 466 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 CHMP4BP1P59074 171 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 STK4Q13043 487 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 HERC4Q5GLZ8 1057 aaPredicted RBP26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 SFR1Q86XK3 245 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 TRAPPC12Q8WVT3 735 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 KAT2BQ92831 832 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 ATP6V0A4Q9HBG4 840 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 SLC39A2Q9NP94 309 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 TBC1D7Q9P0N9 293 aa26.65■■□□□ 1.86
ATPAF1-213ENST00000574428 MYCNP04198 464 aaPredicted RBP26.64■■□□□ 1.86
ATPAF1-213ENST00000574428 EMC2Q15006 297 aa26.64■■□□□ 1.86
ATPAF1-213ENST00000574428 FAM102BQ5T8I3 360 aa26.64■■□□□ 1.86
ATPAF1-213ENST00000574428 XPNPEP1Q9NQW7 623 aa26.64■■□□□ 1.86
ATPAF1-213ENST00000574428 PDLIM7Q9NR12 457 aa26.64■■□□□ 1.86
ATPAF1-213ENST00000574428 COL4A3BPQ9Y5P4 624 aa26.64■■□□□ 1.86
ATPAF1-213ENST00000574428 SLC9C1Q4G0N8 1177 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 MLKLQ8NB16 471 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 MAPK8IP1Q9UQF2 711 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 INSRRP14616 1297 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 CD44P16070 742 aaKnown RBP26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 ZNF131P52739 623 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 NKX3-2P78367 333 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 PURAQ00577 322 aaKnown RBP26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 FAM26FQ5R3K3 315 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 MYCT1Q8N699 235 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 KIAA0895Q8NCT3 520 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 RNF214Q8ND24 703 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 GLIS3Q8NEA6 775 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 SLC7A3Q8WY07 619 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 TIPINQ9BVW5 301 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 FGFBP2Q9BYJ0 223 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 DHX33Q9H6R0 707 aaKnown RBP26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 PARVGQ9HBI0 331 aa26.63■■□□□ 1.85
ATPAF1-213ENST00000574428 RFC5P40937 340 aa26.62■■□□□ 1.85
ATPAF1-213ENST00000574428 IGBP1P78318 339 aa26.62■■□□□ 1.85
ATPAF1-213ENST00000574428 TBC1D8BQ0IIM8 1120 aa26.62■■□□□ 1.85
ATPAF1-213ENST00000574428 KIAA0753Q2KHM9 967 aa26.62■■□□□ 1.85
ATPAF1-213ENST00000574428 MCPH1Q8NEM0 835 aa26.62■■□□□ 1.85
ATPAF1-213ENST00000574428 PPP1R13LQ8WUF5 828 aa26.62■■□□□ 1.85
ATPAF1-213ENST00000574428 RBSNQ9H1K0 784 aa26.62■■□□□ 1.85
ATPAF1-213ENST00000574428 PCDHA2Q9Y5H9 948 aa26.62■■□□□ 1.85
ATPAF1-213ENST00000574428 MYCP01106 439 aaPredicted RBP26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 GAP43P17677 238 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 CTCFP49711 727 aaPredicted RBP26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 PSMD2Q13200 908 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 MFSD10Q14728 455 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 CTU1Q7Z7A3 348 aaKnown RBP26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 ZBTB10Q96DT7 871 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 DRC1Q96MC2 740 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 PPME1Q9Y570 386 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 PPP1R3GB7ZBB8 358 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 PSEN2P49810 448 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 ZNF165P49910 485 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 ZNF484Q5JVG2 852 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 KLHL10Q6JEL2 608 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 UNC93B1Q9H1C4 597 aa26.61■■□□□ 1.85
ATPAF1-213ENST00000574428 MSCO60682 206 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 MAFO75444 373 aaPredicted RBP26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 PRCPP42785 496 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 PPFIA1Q13136 1202 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 LRRC41Q15345 812 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 ODR4Q5SWX8 454 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 LHX8Q68G74 356 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 CXCL17Q6UXB2 119 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 KLHDC9Q8NEP7 349 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 TMEM143Q96AN5 459 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 NAT10Q9H0A0 1025 aaKnown RBP26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 POLR3FQ9H1D9 316 aaPredicted RBP26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 DACH1Q9UI36 760 aa26.6■■□□□ 1.85
ATPAF1-213ENST00000574428 ZEB2O60315 1214 aa26.59■■□□□ 1.85
ATPAF1-213ENST00000574428 KPNA6O60684 536 aa26.59■■□□□ 1.85
ATPAF1-213ENST00000574428 CBX8Q9HC52 389 aa26.59■■□□□ 1.85
ATPAF1-213ENST00000574428 HAS3O00219 553 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 PLS3P13797 630 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 CST5P28325 142 aaPredicted RBP26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 GRIK4Q16099 956 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 KCNA10Q16322 511 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 FAM200AQ8TCP9 573 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 KIFAP3Q92845 792 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 MTG1Q9BT17 334 aaPredicted RBP26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 KATNAL1Q9BW62 490 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 GTPBP4Q9BZE4 634 aaKnown RBP26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 MRPL44Q9H9J2 332 aaKnown RBP26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 OLFML3Q9NRN5 406 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 COL1A2P08123 1366 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 MYH11P35749 1972 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 C22orf31O95567 290 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 SMIM10L2AP0DMW4 78 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 SMIM10L2BP0DMW5 78 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 CASP5P51878 434 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 MTFR1Q15390 333 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 ADSSL1Q8N142 457 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 LRRC71Q8N4P6 559 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 SUGCTQ9HAC7 445 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms