RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-208	ENST00000574218	MXRA8	Q9BRK3	442 aa		13.61	□□□□□ -0.23
CTNS-208	ENST00000574218	ADAM7	Q9H2U9	754 aa		13.61	□□□□□ -0.23
CTNS-208	ENST00000574218	POMK	Q9H5K3	350 aa		13.61	□□□□□ -0.23
CTNS-208	ENST00000574218	ELAC1	Q9H777	363 aa	Known RBP	13.61	□□□□□ -0.23
CTNS-208	ENST00000574218	KCNH7	Q9NS40	1196 aa		13.61	□□□□□ -0.23
CTNS-208	ENST00000574218	SPG21	Q9NZD8	308 aa		13.61	□□□□□ -0.23
CTNS-208	ENST00000574218	HCST	Q9UBK5	93 aa		13.61	□□□□□ -0.23
CTNS-208	ENST00000574218	DBR1	Q9UK59	544 aa	Known RBP	13.61	□□□□□ -0.23
CTNS-208	ENST00000574218	CCDC69	A6NI79	296 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	SPDYE4	A6NLX3	237 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	ZSCAN20	P17040	1043 aa	Predicted RBP	13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	CLCN5	P51795	746 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	CRYBB1	P53674	252 aa	Predicted RBP	13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	ZNF484	Q5JVG2	852 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	DENND4A	Q7Z401	1863 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	CKAP2L	Q8IYA6	745 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	ADSSL1	Q8N142	457 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	PLCD3	Q8N3E9	789 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	FLCN	Q8NFG4	579 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	PPP1R16B	Q96T49	567 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	OSMR	Q99650	979 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	MYL10	Q9BUA6	226 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	DZANK1	Q9NVP4	752 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	TCEAL9	Q9UHQ7	104 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	HCFC2	Q9Y5Z7	792 aa		13.6	□□□□□ -0.23
CTNS-208	ENST00000574218	PLEKHA8P1	O95397	391 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	CALM1	P0DP23	149 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	CALM2	P0DP24	149 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	CALM3	P0DP25	149 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	ZNF76	P36508	570 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	NUCB1	Q02818	461 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	AAMP	Q13685	434 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	KIZ	Q2M2Z5	673 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	ATAT1	Q5SQI0	421 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	RARS2	Q5T160	578 aa	Known RBP	13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	PDXDC2P	Q6P474	469 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	HEATR3	Q7Z4Q2	680 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	FAM228A	Q86W67	206 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	METTL13	Q8N6R0	699 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	RNF169	Q8NCN4	708 aa		13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	ACSF2	Q96CM8	615 aa	Predicted RBP	13.59	□□□□□ -0.23
CTNS-208	ENST00000574218	DDX39A	O00148	427 aa	Known RBP	13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	ASGR2	P07307	311 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	RFX1	P22670	979 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	KIAA1841	Q6NSI8	718 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	MIS18BP1	Q6P0N0	1132 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	KIAA0319L	Q8IZA0	1049 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	ZDHHC14	Q8IZN3	488 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	TMTC2	Q8N394	836 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	SRBD1	Q8N5C6	995 aa	Known RBP	13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	KCNG4	Q8TDN1	519 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	IGDCC4	Q8TDY8	1250 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	TMEM40	Q8WWA1	233 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	TMEM169	Q96HH4	297 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	CDHR5	Q9HBB8	845 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	LY9	Q9HBG7	655 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	ZNF302	Q9NR11	478 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	LIMD1	Q9UGP4	676 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	CDH22	Q9UJ99	828 aa		13.58	□□□□□ -0.24
CTNS-208	ENST00000574218	GVINP1	Q7Z2Y8	2422 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	CLASP2	O75122	1294 aa	Known RBP	13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	CXCL14	O95715	111 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	FOS	P01100	380 aa	Predicted RBP	13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	PBX3	P40426	434 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	FAM189B	P81408	668 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	CEP55	Q53EZ4	464 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	CMTR1	Q8N1G2	835 aa	Known RBP	13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	MRPL43	Q8N983	215 aa	Known RBP	13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	SCLT1	Q96NL6	688 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	CASD1	Q96PB1	797 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	MAP7D2	Q96T17	732 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	MRPL9	Q9BYD2	267 aa	Known RBP	13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	IL25	Q9H293	177 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	AGO4	Q9HCK5	861 aa	Known RBP	13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	CYP26B1	Q9NR63	512 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	FBXL21	Q9UKT6	434 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	CEP131	Q9UPN4	1083 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	AKT3	Q9Y243	479 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	UST	Q9Y2C2	406 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	CACNA1A	O00555	2505 aa		13.57	□□□□□ -0.24
CTNS-208	ENST00000574218	C2orf16	Q68DN1	1984 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	hCG_1642624	A0A1W2PR95	340 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	CARNS1	A5YM72	827 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	C2orf71	A6NGG8	1288 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	STK25	O00506	426 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	PRC1	O43663	620 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	ATG7	O95352	703 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	VTN	P04004	478 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	WEE2	P0C1S8	567 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	AR	P10275	920 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	TMOD1	P28289	359 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	ALDH7A1	P49419	539 aa	Known RBP	13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	METAP2	P50579	478 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	NAPA	P54920	295 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	ANTXR2	P58335	489 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	PTH1R	Q03431	593 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	ITGB3BP	Q13352	177 aa	Predicted RBP	13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	GIT2	Q14161	759 aa		13.56	□□□□□ -0.24
CTNS-208	ENST00000574218	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms