RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 YEATS4O95619 227 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 CXCL10P02778 98 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 MARCKSP29966 332 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 TXLNAP40222 546 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 CLCN3P51790 818 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 NPEPPSP55786 919 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 PKP1Q13835 747 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 PTPAQ15257 358 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 TMEM240Q5SV17 173 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 POTEGQ6S5H5 508 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 FAM43BQ6ZT52 329 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 ZNF365Q70YC5 407 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 LRRC71Q8N4P6 559 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 PIGOQ8TEQ8 1089 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 APBB2Q92870 758 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 ZBTB10Q96DT7 871 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 RNPC3Q96LT9 517 aaKnown RBP14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 SCLT1Q96NL6 688 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 MTRQ99707 1265 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 SH2D3AQ9BRG2 576 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 CELF4Q9BZC1 486 aaKnown RBP14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 DHX33Q9H6R0 707 aaKnown RBP14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 ATP6V0A4Q9HBG4 840 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 DDX19AQ9NUU7 478 aaKnown RBP14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 DNM3Q9UQ16 869 aa14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 SRPRBQ9Y5M8 271 aaKnown RBP14.23□□□□□ -0.13
TRAPPC1-206ENST00000573989 IGKV6-21A0A0C4DH24 114 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 ARHGEF35A5YM69 484 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 SPTLC2O15270 562 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 NBNO60934 754 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 PPP6R2O75170 966 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 BAIAP3O94812 1187 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 CHRNA1P02708 482 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 VTNP04004 478 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 RARRES1P49788 294 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 MGAT3Q09327 533 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 TMEM62Q0P6H9 643 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 IKBKEQ14164 716 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 EMC2Q15006 297 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 ZRSR1Q15695 479 aaKnown RBP14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 FOXD4L6Q3SYB3 417 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 CNKSR3Q6P9H4 555 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 TRAF7Q6Q0C0 670 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 FOXD4L3Q6VB84 417 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 CABP7Q86V35 215 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 LINC01465Q8N7H1 131 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 KRI1Q8N9T8 703 aaKnown RBP14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 LINC00301Q8NCQ3 95 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 KCNG4Q8TDN1 519 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 SEPT8Q92599 483 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 CEP89Q96ST8 783 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 PCDH10Q9P2E7 1040 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 TFIP11Q9UBB9 837 aaKnown RBP14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 GINS2Q9Y248 185 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 SIP14410 1827 aa14.22□□□□□ -0.13
TRAPPC1-206ENST00000573989 TCHHQ07283 1943 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 PP2D1A8MPX8 630 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 ZBBXA8MT70 800 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 ZBTB39O15060 712 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 ASAP2O43150 1006 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 CDC25AP30304 524 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 KCNJ6P48051 423 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 CRYBB1P53674 252 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 EPHB4P54760 987 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 KRT85P78386 507 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 SHHQ15465 462 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 FBXO47Q5MNV8 452 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 HYIQ5T013 277 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 TSHZ1Q6ZSZ6 1077 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 C16orf59Q7L2K0 433 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 OTOP2Q7RTS6 562 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 MCPH1Q8NEM0 835 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 NLRP7Q8WX94 980 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 PSPC1Q8WXF1 523 aaKnown RBP14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 HERVK_113Q902F9 699 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 IFIH1Q9BYX4 1025 aaKnown RBP14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 INO80BQ9C086 356 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 SUCLA2Q9P2R7 463 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 CCDC39Q9UFE4 941 aa14.21□□□□□ -0.13
TRAPPC1-206ENST00000573989 ABHD14A-ACY1A0A1B0GW23 586 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 USO1O60763 962 aaKnown RBP14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 EYA4O95677 639 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 GHRP10912 638 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 NCLP19338 710 aaKnown RBP14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 NLRP11P59045 1033 aaKnown RBP14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 PAK2Q13177 524 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 MXD4Q14582 209 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 MBTPS1Q14703 1052 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 KIZQ2M2Z5 673 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 PLEKHG4Q58EX7 1191 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 C9orf50Q5SZB4 431 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 ZNF410Q86VK4 478 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 RHPN2Q8IUC4 686 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 MMTAG2Q9BU76 263 aaKnown RBP14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 CSRNP2Q9H175 543 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 BHMT2Q9H2M3 363 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 FBXO2Q9UK22 296 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 COL4A3BPQ9Y5P4 624 aa14.2□□□□□ -0.14
TRAPPC1-206ENST00000573989 SLC4A7Q9Y6M7 1214 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms