RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 TMEM240Q5SV17 173 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 EFCAB12Q6NXP0 572 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 ANO5Q75V66 913 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 CATSPER3Q86XQ3 398 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 KCTD17Q8N5Z5 321 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 METTL13Q8N6R0 699 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 DNAJB3Q8WWF6 145 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 WNT8BQ93098 351 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 AK8Q96MA6 479 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 CCDC43Q96MW1 224 aaKnown RBP12.32□□□□□ -0.44
CHD3-216ENST00000573936 IPO9Q96P70 1041 aaKnown RBP12.32□□□□□ -0.44
CHD3-216ENST00000573936 NACC1Q96RE7 527 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 MTIF3Q9H2K0 278 aaKnown RBP12.32□□□□□ -0.44
CHD3-216ENST00000573936 CYP26B1Q9NR63 512 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 CLIC4Q9Y696 253 aa12.32□□□□□ -0.44
CHD3-216ENST00000573936 MORC2Q9Y6X9 1032 aaPredicted RBP12.32□□□□□ -0.44
CHD3-216ENST00000573936 VWA3AA6NCI4 1184 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 GRXCR1A8MXD5 290 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 MED24O75448 989 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 SPATA31C1P0DKV0 1188 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 ACTN1P12814 892 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 LONP1P36776 959 aaKnown RBP12.31□□□□□ -0.44
CHD3-216ENST00000573936 PBX2P40425 430 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 MRPS6P82932 125 aaKnown RBP12.31□□□□□ -0.44
CHD3-216ENST00000573936 IL17AQ16552 155 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 XKR9Q5GH70 373 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 FAM43BQ6ZT52 329 aaPredicted RBP12.31□□□□□ -0.44
CHD3-216ENST00000573936 C16orf59Q7L2K0 433 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 USP38Q8NB14 1042 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 SNX29Q8TEQ0 813 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 SLC7A3Q8WY07 619 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 ASB2Q96Q27 587 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 MAP7D2Q96T17 732 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 FTOQ9C0B1 505 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHD3-216ENST00000573936 FAM49AQ9H0Q0 323 aaPredicted RBP12.31□□□□□ -0.44
CHD3-216ENST00000573936 PRDM12Q9H4Q4 367 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
CHD3-216ENST00000573936 THEGQ9P2T0 379 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 CFAP45Q9UL16 551 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 ATP6V1DQ9Y5K8 247 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 TRPV2Q9Y5S1 764 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 CDY2AQ9Y6F7 541 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 SQORQ9Y6N5 450 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 KDM3AQ9Y4C1 1321 aa12.31□□□□□ -0.44
CHD3-216ENST00000573936 GBF1Q92538 1859 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 IGKV6-21A0A0C4DH24 114 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 MAFO75444 373 aaPredicted RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 BRD1O95696 1058 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 CXCL10P02778 98 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 POLGP54098 1239 aaPredicted RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 NPEPPSP55786 919 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 MGAT3Q09327 533 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 SLC39A14Q15043 492 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 PTPAQ15257 358 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 ODR4Q5SWX8 454 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 FOXD4L5Q5VV16 416 aaPredicted RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 PLA2G4FQ68DD2 849 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 FAM173BQ6P4H8 233 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 TRAF7Q6Q0C0 670 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 ZNF365Q70YC5 407 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 DEFB128Q7Z7B8 93 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 KIAA0319LQ8IZA0 1049 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 PIAS4Q8N2W9 510 aaPredicted RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 TCP11Q8WWU5 503 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 FOXD4L4Q8WXT5 416 aaPredicted RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 CEP89Q96ST8 783 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 PBX4Q9BYU1 374 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 CELF4Q9BZC1 486 aaKnown RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 NT5C3AQ9H0P0 336 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 SLC28A3Q9HAS3 691 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 DBR1Q9UK59 544 aaKnown RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 AKT3Q9Y243 479 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 SRPRBQ9Y5M8 271 aaKnown RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 BDP1A6H8Y1 2624 aa12.3□□□□□ -0.44
CHD3-216ENST00000573936 MYH9P35579 1960 aaKnown RBP12.3□□□□□ -0.44
CHD3-216ENST00000573936 KAT6AQ92794 2004 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 TMEM150BA6NC51 233 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 NBNO60934 754 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 EFCAB14O75071 495 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 DGAT1O75907 488 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 YEATS4O95619 227 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 CHRNA1P02708 482 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 CTSHP09668 335 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 UBA7P41226 1012 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 CLCN3P51790 818 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 NUCB2P80303 420 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 CEBPZQ03701 1054 aaKnown RBP12.29□□□□□ -0.44
CHD3-216ENST00000573936 STK38Q15208 465 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 RAB30Q15771 203 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 RASIP1Q5U651 963 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 CNKSR3Q6P9H4 555 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 LINC01465Q8N7H1 131 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 LINC00301Q8NCQ3 95 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 ADAMTS19Q8TE59 1207 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 HERVK_113Q902F9 699 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 APBB2Q92870 758 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 ZBTB10Q96DT7 871 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms