RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 EVI5O60447 810 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 BIRC3Q13489 604 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 VPS72Q15906 364 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 SLFN13Q68D06 897 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 SYCE1Q8N0S2 351 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 SLC30A5Q8TAD4 765 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 SEC14L1Q92503 715 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 CYFIP2Q96F07 1278 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 DPH5Q9H2P9 285 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
SCARF1-206ENST00000573852 DCDC2CA8MYV0 355 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 HLA-DOAP06340 250 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 FERP16591 822 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 TAL1P17542 331 aaPredicted RBP20.75■□□□□ 0.91
SCARF1-206ENST00000573852 NPEPPSP55786 919 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 C6orf89Q6UWU4 347 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 RUFY4Q6ZNE9 571 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 CCDC26Q8TAB7 109 aa20.75■□□□□ 0.91
SCARF1-206ENST00000573852 FAM170AA1A519 330 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 H0YHG0 523 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 BUB1BO60566 1050 aaPredicted RBP20.74■□□□□ 0.91
SCARF1-206ENST00000573852 POU5F1Q01860 360 aaKnown RBP20.74■□□□□ 0.91
SCARF1-206ENST00000573852 GLYCTKQ8IVS8 523 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 CYP2W1Q8TAV3 490 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 RGL1Q9NZL6 768 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 VAV3Q9UKW4 847 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 GTPBP10A4D1E9 387 aaKnown RBP20.74■□□□□ 0.91
SCARF1-206ENST00000573852 GMNCA6NCL1 334 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 MSH4O15457 936 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 FGGP02679 453 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 STAT1P42224 750 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 MTMR3Q13615 1198 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 SLC35G2Q8TBE7 412 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 GGA2Q9UJY4 613 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 AMFRQ9UKV5 643 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 PPP1R9AQ9ULJ8 1098 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 NOVA2Q9UNW9 492 aaKnown RBP20.74■□□□□ 0.91
SCARF1-206ENST00000573852 SUGT1Q9Y2Z0 365 aa20.74■□□□□ 0.91
SCARF1-206ENST00000573852 EML1O00423 815 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 TBCAO75347 108 aaKnown RBP20.73■□□□□ 0.91
SCARF1-206ENST00000573852 GYS1P13807 737 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 HOXA10P31260 410 aaPredicted RBP20.73■□□□□ 0.91
SCARF1-206ENST00000573852 DHX9Q08211 1270 aaKnown RBP20.73■□□□□ 0.91
SCARF1-206ENST00000573852 USH1GQ495M9 461 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 ODF2Q5BJF6 829 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 AGBL2Q5U5Z8 902 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 APOBEC3HQ6NTF7 200 aaKnown RBP20.73■□□□□ 0.91
SCARF1-206ENST00000573852 DCAF4Q8WV16 495 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 C8orf37Q96NL8 207 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 CEP89Q96ST8 783 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 TRIM51Q9BSJ1 452 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 COA1Q9GZY4 146 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 IGSF9BQ9UPX0 1349 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 TRAPPC3O43617 180 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 DCAF12L1Q5VU92 463 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 MKL1Q969V6 931 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 CCDC17Q96LX7 622 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 TRIM31Q9BZY9 425 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 ZMYM2Q9UBW7 1377 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
SCARF1-206ENST00000573852 SOX5P35711 763 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 SREBF1P36956 1147 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 PPP2R2AP63151 447 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 QPCTQ16769 361 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 SWT1Q5T5J6 900 aaKnown RBP20.72■□□□□ 0.91
SCARF1-206ENST00000573852 SIAH1Q8IUQ4 282 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 FAM20AQ96MK3 541 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 EIF2AK1Q9BQI3 630 aaKnown RBP20.72■□□□□ 0.91
SCARF1-206ENST00000573852 LRRC4BQ9NT99 713 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 DDX20Q9UHI6 824 aaKnown RBP20.72■□□□□ 0.91
SCARF1-206ENST00000573852 RABGAP1Q9Y3P9 1069 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 LY75O60449 1722 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 F8VZ95 297 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 DDX3YO15523 660 aaKnown RBP20.72■□□□□ 0.91
SCARF1-206ENST00000573852 EYA4O95677 639 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 NMT1P30419 496 aaKnown RBP20.72■□□□□ 0.91
SCARF1-206ENST00000573852 ZC2HC1CQ53FD0 456 aaPredicted RBP20.72■□□□□ 0.91
SCARF1-206ENST00000573852 RINT1Q6NUQ1 792 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 SLC30A10Q6XR72 485 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 FAM186BQ8IYM0 893 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 PIGOQ8TEQ8 1089 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 ATP8B4Q8TF62 1192 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 NGLY1Q96IV0 654 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 AMNQ9BXJ7 453 aa20.72■□□□□ 0.91
SCARF1-206ENST00000573852 UTP11Q9Y3A2 253 aaKnown RBP20.72■□□□□ 0.91
SCARF1-206ENST00000573852 BACH1O14867 736 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 ABCB4P21439 1286 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 MNAT1P51948 309 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 MAGOHP61326 146 aaKnown RBP20.71■□□□□ 0.91
SCARF1-206ENST00000573852 PPATQ06203 517 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 ACTN3Q08043 901 aaPredicted RBP20.71■□□□□ 0.91
SCARF1-206ENST00000573852 DRAP1Q14919 205 aaPredicted RBP20.71■□□□□ 0.91
SCARF1-206ENST00000573852 MAGOHBQ96A72 148 aaKnown RBP20.71■□□□□ 0.91
SCARF1-206ENST00000573852 FAM114A2Q9NRY5 505 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 TTC7AQ9ULT0 858 aaPredicted RBP20.71■□□□□ 0.91
SCARF1-206ENST00000573852 SPDYE3A6NKU9 549 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 HOXA13P31271 388 aaPredicted RBP20.71■□□□□ 0.91
SCARF1-206ENST00000573852 COPB2P35606 906 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 CACNB3P54284 484 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 COG2Q14746 738 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms