RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 TUFT1Q9NNX1 390 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 YBX2Q9Y2T7 364 aaKnown RBP15.14■□□□□ 0.01
RPAIN-213ENST00000573577 PPME1Q9Y570 386 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 ATP6V1DQ9Y5K8 247 aa15.14■□□□□ 0.01
RPAIN-213ENST00000573577 MYH9P35579 1960 aaKnown RBP15.14■□□□□ 0.01
RPAIN-213ENST00000573577 MAGEB2O15479 319 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 SLITRK3O94933 977 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 BRD1O95696 1058 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 GHRP10912 638 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 MUTP22033 750 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 DEFB103AP81534 67 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 CYP4A11Q02928 519 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 TMEM62Q0P6H9 643 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 PKP1Q13835 747 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 LPIN1Q14693 890 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 FBXO47Q5MNV8 452 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 FAM173BQ6P4H8 233 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 KIAA0319LQ8IZA0 1049 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 AK8Q96MA6 479 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 GUCD1Q96NT3 240 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 POLR3CQ9BUI4 534 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-213ENST00000573577 NIFKQ9BYG3 293 aaKnown RBP15.13■□□□□ 0.01
RPAIN-213ENST00000573577 NKX2-4Q9H2Z4 354 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 RGL1Q9NZL6 768 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 SEPT9Q9UHD8 586 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-213ENST00000573577 TRPV2Q9Y5S1 764 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 CLIC4Q9Y696 253 aa15.13■□□□□ 0.01
RPAIN-213ENST00000573577 VWA3AA6NCI4 1184 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 DDX11L8A8MPP1 907 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 LYPLA2O95372 231 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 RPA1P27694 616 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 YWHABP31946 246 aaKnown RBP15.12■□□□□ 0.01
RPAIN-213ENST00000573577 NUCB2P80303 420 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 CTTNQ14247 550 aaKnown RBP15.12■□□□□ 0.01
RPAIN-213ENST00000573577 KRT79Q5XKE5 535 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 TSHZ1Q6ZSZ6 1077 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 EXOC8Q8IYI6 725 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 METTL13Q8N6R0 699 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 CCDC43Q96MW1 224 aaKnown RBP15.12■□□□□ 0.01
RPAIN-213ENST00000573577 USP28Q96RU2 1077 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 JPH2Q9BR39 696 aaPredicted RBP15.12■□□□□ 0.01
RPAIN-213ENST00000573577 CELF4Q9BZC1 486 aaKnown RBP15.12■□□□□ 0.01
RPAIN-213ENST00000573577 CFAP45Q9UL16 551 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 MORC2Q9Y6X9 1032 aaPredicted RBP15.12■□□□□ 0.01
RPAIN-213ENST00000573577 KDM3AQ9Y4C1 1321 aa15.12■□□□□ 0.01
RPAIN-213ENST00000573577 CDH23Q9H251 3354 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 SIP14410 1827 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 STBD1O95210 358 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 AMHP03971 560 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 XRCC6P12956 609 aaKnown RBP eCLIP15.11■□□□□ 0.01
RPAIN-213ENST00000573577 MYOGP15173 224 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 TMOD1P28289 359 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 CCT6AP40227 531 aaKnown RBP15.11■□□□□ 0.01
RPAIN-213ENST00000573577 NASPP49321 788 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-213ENST00000573577 CEBPZQ03701 1054 aaKnown RBP15.11■□□□□ 0.01
RPAIN-213ENST00000573577 TBC1D8BQ0IIM8 1120 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 STK38Q15208 465 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 PTPAQ15257 358 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 TARBP2Q15633 366 aaKnown RBP15.11■□□□□ 0.01
RPAIN-213ENST00000573577 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.11■□□□□ 0.012e-8■■■■■ 28.9
RPAIN-213ENST00000573577 TMCO2Q7Z6W1 182 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-213ENST00000573577 CATSPER3Q86XQ3 398 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 USP38Q8NB14 1042 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 CDX2Q99626 313 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-213ENST00000573577 SLC28A3Q9HAS3 691 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 SQORQ9Y6N5 450 aa15.11■□□□□ 0.01
RPAIN-213ENST00000573577 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 TMEM150BA6NC51 233 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 SLC26A4O43511 780 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 TLL1O43897 1013 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 GJB5O95377 273 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 YEATS4O95619 227 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 CA3P07451 260 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 LONP1P36776 959 aaKnown RBP15.1■□□□□ 0.01
RPAIN-213ENST00000573577 CLCN3P51790 818 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 GRIN2CQ14957 1233 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 SLC39A14Q15043 492 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 IL17AQ16552 155 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 MTERF2Q49AM1 385 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 PPP2R2DQ66LE6 453 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 EFCAB12Q6NXP0 572 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 ANO5Q75V66 913 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 LINC01465Q8N7H1 131 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 SNX29Q8TEQ0 813 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 CEP170P1Q96L14 293 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 NACC1Q96RE7 527 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 ZBED2Q9BTP6 218 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 AGO3Q9H9G7 860 aaKnown RBP15.1■□□□□ 0.01
RPAIN-213ENST00000573577 CYP26B1Q9NR63 512 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 ANKEF1Q9NU02 776 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 WRAP73Q9P2S5 460 aaPredicted RBP15.1■□□□□ 0.01
RPAIN-213ENST00000573577 STXBP5LQ9Y2K9 1186 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 GBF1Q92538 1859 aa15.1■□□□□ 0.01
RPAIN-213ENST00000573577 MED24O75448 989 aa15.09■□□□□ 0.01
RPAIN-213ENST00000573577 VTNP04004 478 aa15.09■□□□□ 0.01
RPAIN-213ENST00000573577 SPATA31C1P0DKV0 1188 aa15.09■□□□□ 0.01
RPAIN-213ENST00000573577 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
RPAIN-213ENST00000573577 CD52P31358 61 aa15.09■□□□□ 0.01
RPAIN-213ENST00000573577 VASPP50552 380 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms