RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 PCDHB6Q9Y5E3 794 aa23.15■■□□□ 1.3
CHMP6-204ENST00000572778 LAMA2P24043 3122 aaKnown RBP23.15■■□□□ 1.3
CHMP6-204ENST00000572778 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.14■■□□□ 1.29
CHMP6-204ENST00000572778 CA3P07451 260 aa23.14■■□□□ 1.29
CHMP6-204ENST00000572778 YWHABP31946 246 aaKnown RBP23.14■■□□□ 1.29
CHMP6-204ENST00000572778 CRYBB1P53674 252 aaPredicted RBP23.14■■□□□ 1.29
CHMP6-204ENST00000572778 NLRP11P59045 1033 aaKnown RBP23.14■■□□□ 1.29
CHMP6-204ENST00000572778 TMEM266Q2M3C6 531 aa23.14■■□□□ 1.29
CHMP6-204ENST00000572778 CEP89Q96ST8 783 aa23.14■■□□□ 1.29
CHMP6-204ENST00000572778 OSMRQ99650 979 aa23.14■■□□□ 1.29
CHMP6-204ENST00000572778 HSD17B14Q9BPX1 270 aa23.14■■□□□ 1.29
CHMP6-204ENST00000572778 FOXD4L1Q9NU39 408 aa23.14■■□□□ 1.29
CHMP6-204ENST00000572778 ZBTB39O15060 712 aa23.13■■□□□ 1.29
CHMP6-204ENST00000572778 GPR32O75388 356 aa23.13■■□□□ 1.29
CHMP6-204ENST00000572778 MAFO75444 373 aaPredicted RBP23.13■■□□□ 1.29
CHMP6-204ENST00000572778 RPS6KA5O75582 802 aa23.13■■□□□ 1.29
CHMP6-204ENST00000572778 UPP2O95045 317 aa23.13■■□□□ 1.29
CHMP6-204ENST00000572778 GJB5O95377 273 aa23.13■■□□□ 1.29
CHMP6-204ENST00000572778 DNM2P50570 870 aa23.13■■□□□ 1.29
CHMP6-204ENST00000572778 NFX1Q12986 1120 aaKnown RBP23.13■■□□□ 1.29
CHMP6-204ENST00000572778 GRIN2CQ14957 1233 aa23.13■■□□□ 1.29
CHMP6-204ENST00000572778 ZNF579Q8NAF0 562 aaKnown RBP23.13■■□□□ 1.29
CHMP6-204ENST00000572778 NEK9Q8TD19 979 aa23.13■■□□□ 1.29
CHMP6-204ENST00000572778 ZNF668Q96K58 619 aaPredicted RBP23.13■■□□□ 1.29
CHMP6-204ENST00000572778 CDX2Q99626 313 aaPredicted RBP23.13■■□□□ 1.29
CHMP6-204ENST00000572778 NOC2LQ9Y3T9 749 aaKnown RBP23.13■■□□□ 1.29
CHMP6-204ENST00000572778 PTGDRQ13258 359 aa23.12■■□□□ 1.29
CHMP6-204ENST00000572778 DRP2Q13474 957 aa23.12■■□□□ 1.29
CHMP6-204ENST00000572778 RILPL1Q5EBL4 403 aa23.12■■□□□ 1.29
CHMP6-204ENST00000572778 XKR9Q5GH70 373 aa23.12■■□□□ 1.29
CHMP6-204ENST00000572778 C4orf32Q8N8J7 132 aa23.12■■□□□ 1.29
CHMP6-204ENST00000572778 TMEM40Q8WWA1 233 aa23.12■■□□□ 1.29
CHMP6-204ENST00000572778 SCLT1Q96NL6 688 aa23.12■■□□□ 1.29
CHMP6-204ENST00000572778 RAD9AQ99638 391 aa23.12■■□□□ 1.29
CHMP6-204ENST00000572778 JPH2Q9BR39 696 aaPredicted RBP23.12■■□□□ 1.29
CHMP6-204ENST00000572778 MYH9P35579 1960 aaKnown RBP23.12■■□□□ 1.29
CHMP6-204ENST00000572778 IGKV6-21A0A0C4DH24 114 aa23.11■■□□□ 1.29
CHMP6-204ENST00000572778 VPS37CA5D8V6 355 aaPredicted RBP23.11■■□□□ 1.29
CHMP6-204ENST00000572778 ENPP3O14638 875 aa23.11■■□□□ 1.29
CHMP6-204ENST00000572778 PDCP20941 246 aa23.11■■□□□ 1.29
CHMP6-204ENST00000572778 POLGP54098 1239 aaPredicted RBP23.11■■□□□ 1.29
CHMP6-204ENST00000572778 SLC7A3Q8WY07 619 aa23.11■■□□□ 1.29
CHMP6-204ENST00000572778 MYLIPQ8WY64 445 aa23.11■■□□□ 1.29
CHMP6-204ENST00000572778 TOP1MTQ969P6 601 aa23.11■■□□□ 1.29
CHMP6-204ENST00000572778 INTS4Q96HW7 963 aaKnown RBP23.11■■□□□ 1.29
CHMP6-204ENST00000572778 FTHL17Q9BXU8 183 aa23.11■■□□□ 1.29
CHMP6-204ENST00000572778 BMP2KQ9NSY1 1161 aaPredicted RBP23.11■■□□□ 1.29
CHMP6-204ENST00000572778 SUCLA2Q9P2R7 463 aaPredicted RBP23.11■■□□□ 1.29
CHMP6-204ENST00000572778 LCHNA4D1U4 455 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 GPR182O15218 404 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 LYPLA2O95372 231 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 GPC3P51654 580 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 ODR4Q5SWX8 454 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 EXOC8Q8IYI6 725 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 ZNF710Q8N1W2 664 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 ERMNQ8TAM6 284 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 NLRP7Q8WX94 980 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 SNX21Q969T3 373 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 CCDC43Q96MW1 224 aaKnown RBP23.1■■□□□ 1.29
CHMP6-204ENST00000572778 ADAMTS10Q9H324 1103 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.1■■□□□ 1.29
CHMP6-204ENST00000572778 ST3GAL5Q9UNP4 418 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 PPME1Q9Y570 386 aa23.1■■□□□ 1.29
CHMP6-204ENST00000572778 A0A087WWV3 80 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 RFC5P40937 340 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 CATSPER3Q86XQ3 398 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 RHPN2Q8IUC4 686 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 HSCBQ8IWL3 235 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 PIGOQ8TEQ8 1089 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 LINC01599Q8WXQ3 324 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 PRDM12Q9H4Q4 367 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 ERVK-5Q9HDB9 667 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 STXBP5LQ9Y2K9 1186 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 INSL6Q9Y581 213 aa23.09■■□□□ 1.29
CHMP6-204ENST00000572778 LAD1O00515 517 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 MED24O75448 989 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 ARHGEF15O94989 841 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 SPATA31C1P0DKV0 1188 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 EIF4BP23588 611 aaKnown RBP23.08■■□□□ 1.29
CHMP6-204ENST00000572778 FXR2P51116 673 aaKnown RBP eCLIP23.08■■□□□ 1.29
CHMP6-204ENST00000572778 CDC42EP1Q00587 391 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 TAP1Q03518 808 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 RTN4RL1Q86UN2 441 aaPredicted RBP23.08■■□□□ 1.29
CHMP6-204ENST00000572778 FERMT3Q86UX7 667 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 FAM228AQ86W67 206 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 YME1L1Q96TA2 773 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 TMX1Q9H3N1 280 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 DHX33Q9H6R0 707 aaKnown RBP23.08■■□□□ 1.29
CHMP6-204ENST00000572778 CERS4Q9HA82 394 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 TUFT1Q9NNX1 390 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 ANKEF1Q9NU02 776 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 LRWD1Q9UFC0 647 aa23.08■■□□□ 1.29
CHMP6-204ENST00000572778 IBSPP21815 317 aaPredicted RBP23.07■■□□□ 1.28
CHMP6-204ENST00000572778 DTHD1Q6ZMT9 781 aa23.07■■□□□ 1.28
CHMP6-204ENST00000572778 TMEM143Q96AN5 459 aa23.07■■□□□ 1.28
CHMP6-204ENST00000572778 POLR3CQ9BUI4 534 aaPredicted RBP23.07■■□□□ 1.28
CHMP6-204ENST00000572778 RAB34Q9BZG1 259 aa23.07■■□□□ 1.28
CHMP6-204ENST00000572778 SIP14410 1827 aa23.07■■□□□ 1.28
CHMP6-204ENST00000572778 DENND3A2RUS2 1198 aa23.06■■□□□ 1.28
CHMP6-204ENST00000572778 DARSP14868 501 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms